Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMA1Q9UHB6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMA1Q9UHB6 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMA1Q9UHB6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 SRP72P2-201ENST00000344851 1979 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RNU6-533P-201ENST00000384144 107 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RNU6-432P-201ENST00000384196 109 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 MIR19A-201ENST00000384878 82 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RNU6-754P-201ENST00000391166 107 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RPL7P25-201ENST00000404151 721 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 CCNG1P1-201ENST00000406783 885 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC078974.1-201ENST00000411597 223 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 YPEL5P1-201ENST00000419731 367 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC244035.1-201ENST00000430042 390 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RPL35AP22-201ENST00000436855 335 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 MTND2P4-201ENST00000445034 1004 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 COX6CP12-201ENST00000446748 202 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC116337.2-201ENST00000477662 156 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RPL23AP41-201ENST00000484754 458 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC135721.1-201ENST00000497954 479 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC112204.1-201ENST00000502591 103 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC117522.2-201ENST00000510049 657 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 IGKV2-26-201ENST00000518305 343 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC060788.1-201ENST00000521318 469 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 HMGN1P28-201ENST00000521340 364 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 ERHP1-201ENST00000523006 310 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 DEFB108D-201ENST00000527787 222 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 HIGD1AP10-201ENST00000527837 282 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AL391156.1-201ENST00000554965 554 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 MIR3186-201ENST00000577404 85 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC012065.4-201ENST00000602445 679 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC068790.3-201ENST00000602988 553 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC024941.1-201ENST00000612250 334 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC104010.1-201ENST00000616889 150 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC068831.8-201ENST00000620171 435 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AL356321.1-201ENST00000621360 228 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AL159972.1-201ENST00000625150 448 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC019226.1-201ENST00000625666 515 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 AC092326.2-201ENST00000624772 1561 ntBASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.66□□□□□ -1.82
LIMA1Q9UHB6 MTND4P4-201ENST00000439033 1366 ntBASIC3.65□□□□□ -1.82
LIMA1Q9UHB6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.65□□□□□ -1.82
LIMA1Q9UHB6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
LIMA1Q9UHB6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 DEFB108F-201ENST00000344638 222 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RNU1-70P-201ENST00000362618 164 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RNA5SP119-201ENST00000362715 117 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 U3.11-201ENST00000364476 212 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RNU5E-5P-201ENST00000365379 116 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 MIR1302-8-201ENST00000408342 128 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 HMGB3P23-201ENST00000414981 585 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 SYF2P2-201ENST00000417620 583 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 CYCSP46-201ENST00000423569 204 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC129850.1-201ENST00000436203 508 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RPL22P17-201ENST00000438729 315 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AL049734.2-201ENST00000441066 616 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RPS27P29-201ENST00000463110 252 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC092754.2-201ENST00000463506 460 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 RN7SL330P-201ENST00000469709 307 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC068657.1-201ENST00000520807 306 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 CCNG2P1-201ENST00000549521 1000 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 ZNF519P3-201ENST00000557158 1032 ntBASIC3.65□□□□□ -1.83
LIMA1Q9UHB6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms