Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 RPL7P30-201ENST00000420888 709 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 ZYG11AP1-201ENST00000430329 837 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 MTCO3P5-201ENST00000433620 714 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 RPS24P1-201ENST00000438550 371 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC239367.2-201ENST00000447309 705 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC006499.5-201ENST00000505037 514 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 Y_RNA.695-201ENST00000516715 107 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 U73023.1-201ENST00000603134 700 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC239868.4-201ENST00000608318 671 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL020991.1-201ENST00000612314 373 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC243773.3-201ENST00000613270 256 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AC090582.1-201ENST00000636321 199 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
UPF2Q9HAU5 AL161431.1-201ENST00000618966 4205 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 GDI2P1-201ENST00000429312 1336 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 PABPC1P9-201ENST00000426076 1612 ntBASIC3.66□□□□□ -1.82
UPF2Q9HAU5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
UPF2Q9HAU5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.65□□□□□ -1.82
UPF2Q9HAU5 FAM35CP-201ENST00000554755 2470 ntBASIC3.65□□□□□ -1.82
UPF2Q9HAU5 AP002907.1-201ENST00000606361 1430 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 RPL9P7-201ENST00000330965 580 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 Y_RNA.97-201ENST00000363094 102 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 RNU6-723P-201ENST00000383973 107 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 SNORA7.4-201ENST00000384249 137 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC016769.3-201ENST00000396562 315 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 EI24P1-201ENST00000416584 867 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC096632.1-201ENST00000427395 310 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 DPPA2P1-201ENST00000428060 556 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 UBE2FP3-201ENST00000436366 524 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AL031667.1-201ENST00000440222 725 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 Z95327.1-201ENST00000446082 482 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 NPM1P49-201ENST00000448027 714 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 RNU7-136P-201ENST00000458819 69 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 RN7SL863P-201ENST00000462370 296 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC097493.1-201ENST00000463958 372 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC109925.1-201ENST00000478069 331 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 DSTNP2-201ENST00000504533 515 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC091965.2-201ENST00000512324 613 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AP003033.1-201ENST00000527244 415 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC034105.3-201ENST00000565294 442 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AGGF1P4-201ENST00000568249 801 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 MIR3922-201ENST00000585192 84 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC068790.2-201ENST00000602601 557 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 IGHV3-29-201ENST00000604817 344 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC107214.2-201ENST00000608204 634 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC004832.5-201ENST00000608677 401 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC069234.5-201ENST00000611056 416 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC122108.2-201ENST00000611946 526 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC010338.1-201ENST00000621823 717 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC008443.7-201ENST00000622195 246 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 U6.101-201ENST00000637707 76 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 AC006927.3-201ENST00000638789 384 ntBASIC3.65□□□□□ -1.83
UPF2Q9HAU5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
UPF2Q9HAU5 MTND4P16-201ENST00000466108 1367 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 DDX43P2-201ENST00000604753 1354 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RNU1-85P-201ENST00000364127 164 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 PTMAP2-201ENST00000397627 327 ntBASIC3.64□□□□□ -1.83
UPF2Q9HAU5 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.64□□□□□ -1.83
UPF2Q9HAU5 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms