Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AL450472.3-201ENST00000615578 367 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC002550.2-201ENST00000621246 394 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 AC110774.1-201ENST00000623567 2018 ntBASIC3.12□□□□□ -1.91
VIPAS39Q9H9C1 RPL9P7-201ENST00000330965 580 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 RPL7P46-201ENST00000425129 740 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC004866.2-201ENST00000438285 481 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC112653.1-201ENST00000443851 386 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 NUTF2P7-201ENST00000453086 375 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC021382.1-201ENST00000483523 359 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 MTND4LP22-201ENST00000508209 276 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 RN7SKP13-201ENST00000515933 244 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 RNA5SP216-201ENST00000516111 123 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 RNA5SP468-201ENST00000516782 93 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AP003497.1-201ENST00000528472 562 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC107016.2-201ENST00000547968 190 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC008015.1-201ENST00000555505 465 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 HSPE1P5-201ENST00000561489 272 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 RN7SL703P-201ENST00000578485 302 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AL357094.1-201ENST00000603845 844 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC012443.1-201ENST00000605605 231 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 VIS1.1-201ENST00000610517 203 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 AC002076.2-201ENST00000617362 122 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
VIPAS39Q9H9C1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC010733.2-201ENST00000589496 5702 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC119751.3-201ENST00000399720 670 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 HMGN1P24-201ENST00000412282 298 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 UBE2D3P1-201ENST00000436669 444 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 SNORD121B-201ENST00000458838 81 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC103987.1-201ENST00000473394 348 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC006483.1-201ENST00000487308 313 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 RN7SKP282-201ENST00000516824 299 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC087276.1-201ENST00000529659 480 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 DUXAP5-201ENST00000529668 529 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 COX6CP3-201ENST00000580869 223 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 MIR4276-201ENST00000584832 70 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC008751.2-201ENST00000597885 980 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AL031985.2-201ENST00000600955 480 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AL109653.1-201ENST00000603091 248 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC013444.2-201ENST00000603317 787 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 ELOCP35-201ENST00000604289 336 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC018638.7-201ENST00000605836 1114 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC097520.1-201ENST00000624435 385 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC068724.3-201ENST00000625906 87 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.1□□□□□ -1.91
VIPAS39Q9H9C1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 TAB3P1-202ENST00000452645 1634 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 Z83843.1-201ENST00000604070 3685 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 RNU1-35P-201ENST00000362782 153 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 RNU6-1078P-201ENST00000364522 103 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 CCDC58P2-201ENST00000417131 366 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.09□□□□□ -1.91
VIPAS39Q9H9C1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms