Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL590099.1-201ENST00000615276 138 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 MIR6130-201ENST00000619419 109 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 AL360181.4-201ENST00000621752 134 ntBASIC3.92□□□□□ -1.78
USP44Q9H0E7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP44Q9H0E7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
USP44Q9H0E7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 RNU6-501P-201ENST00000364072 100 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 RNU6-1207P-201ENST00000384343 107 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 RNU2-47P-201ENST00000410649 186 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 RNU2-37P-201ENST00000410695 177 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 TPMTP3-201ENST00000411928 735 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 RPS27AP14-201ENST00000422868 454 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 MED14P1-201ENST00000430517 648 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 LSM1P1-201ENST00000438629 273 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC112653.1-201ENST00000443851 386 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP44Q9H0E7 OR6C5P-201ENST00000452388 923 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AP1S2P1-201ENST00000457344 379 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 snoU13.4-201ENST00000458916 104 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 RN7SL442P-201ENST00000473804 320 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 RNU6-1073P-201ENST00000517182 106 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC037471.2-201ENST00000564941 598 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC087481.2-201ENST00000565492 330 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 BNIP3P23-201ENST00000599655 511 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC010620.1-201ENST00000601088 1102 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 Z94722.1-201ENST00000604328 474 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC008443.7-201ENST00000622195 246 ntBASIC3.91□□□□□ -1.78
USP44Q9H0E7 AC006378.2-201ENST00000623178 2476 ntBASIC3.9□□□□□ -1.78
USP44Q9H0E7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.78
USP44Q9H0E7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
USP44Q9H0E7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP44Q9H0E7 RNU6-173P-201ENST00000364215 104 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 U3.20-201ENST00000390909 217 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 SNORA48.2-201ENST00000390926 124 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 RN7SKP220-201ENST00000410611 288 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 RNA5SP107-201ENST00000411358 122 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 RSU1P2-202ENST00000437884 485 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 UBE2D3P4-201ENST00000441973 436 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC016696.1-201ENST00000446949 318 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AP000542.1-201ENST00000448473 371 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 MTND3P7-201ENST00000474435 343 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC096751.1-202ENST00000502691 1067 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 MLLT10P2-201ENST00000506434 249 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC022483.1-201ENST00000514020 567 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC106038.2-201ENST00000520706 568 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 HMGN1P28-201ENST00000521340 364 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC009101.1-201ENST00000568135 242 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC011260.1-201ENST00000578420 472 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 AL590240.3-201ENST00000621416 943 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC009268.2-201ENST00000621925 457 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 AC091965.5-201ENST00000624785 342 ntBASIC3.9□□□□□ -1.79
USP44Q9H0E7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP44Q9H0E7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USP44Q9H0E7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP44Q9H0E7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 RNU6-777P-201ENST00000364265 104 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP44Q9H0E7 RNU6-769P-201ENST00000384407 104 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 SNORD15B-201ENST00000384714 146 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 SNORD67-201ENST00000390833 111 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 RPL23AP83-201ENST00000434984 473 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC004866.2-201ENST00000438285 481 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AL512286.1-201ENST00000439244 400 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC234775.1-201ENST00000454247 670 ntBASIC3.89□□□□□ -1.79
USP44Q9H0E7 AC006539.3-201ENST00000454258 129 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms