Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 MIR1179-201ENST00000408703 91 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 HSPE1P12-201ENST00000412576 301 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AL353748.1-201ENST00000440753 474 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AC005297.2-201ENST00000450430 606 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 RNU7-182P-201ENST00000459009 62 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-333P-201ENST00000459117 107 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 RN7SKP219-201ENST00000516825 296 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-988P-201ENST00000519081 107 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AC022634.1-201ENST00000520765 532 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AL109918.3-201ENST00000603072 338 ntBASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CNTNAP4Q9C0A0 MAPK10-349ENST00000641767 3661 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RNA5SP258-201ENST00000362750 119 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.339-201ENST00000365325 102 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-1207P-201ENST00000384343 107 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RNU1-44P-201ENST00000384453 163 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RPL31P45-201ENST00000419532 356 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC012065.2-201ENST00000421295 375 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AL590233.1-201ENST00000430017 456 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 TIMM9P1-201ENST00000436122 256 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 MTND2P29-201ENST00000438595 412 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 Z98949.2-201ENST00000440996 144 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-1218P-201ENST00000458990 108 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AL049714.1-201ENST00000466686 347 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC005726.1-201ENST00000494679 427 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC021146.1-201ENST00000511202 716 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.665-201ENST00000516177 98 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RNU6-864P-201ENST00000516256 108 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 Y_RNA.720-201ENST00000517166 92 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC110588.1-201ENST00000559699 137 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC009852.2-201ENST00000567898 485 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 MIR4503-201ENST00000582187 83 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC005255.1-201ENST00000593748 216 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AL592436.1-201ENST00000605135 558 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AC019193.3-201ENST00000609144 554 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AL596245.1-201ENST00000618994 362 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AL133216.2-202ENST00000634512 349 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 AP001284.1-201ENST00000528393 2118 ntBASIC5.28□□□□□ -1.56
CNTNAP4Q9C0A0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC092079.1-201ENST00000558620 1985 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.28-201ENST00000362554 111 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 RNU4-66P-201ENST00000365199 138 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.367-201ENST00000365544 101 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.373-201ENST00000365600 103 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 SNORA22B-201ENST00000383876 138 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.414-201ENST00000384011 101 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 MIR558-201ENST00000384920 94 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 SNORD66.1-201ENST00000391230 76 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AL590704.1-201ENST00000402856 794 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 Y_RNA.605-201ENST00000410577 105 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC074085.1-201ENST00000413598 418 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 MED13P1-201ENST00000428342 171 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 OR4K11P-201ENST00000431829 904 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 RPS3AP52-201ENST00000435639 297 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 SNRPEP4-201ENST00000435815 279 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 YWHAZP8-201ENST00000436935 731 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 RPS26P2-201ENST00000440331 348 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 NANOGP10-201ENST00000453325 895 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 MTND1P9-201ENST00000453775 944 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 VN1R17P-201ENST00000472048 1090 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 RPL7P20-201ENST00000520308 745 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC068993.1-201ENST00000546724 589 ntBASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.27□□□□□ -1.57
CNTNAP4Q9C0A0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms