Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 Y_RNA.428-201ENST00000384078 102 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-356P-201ENST00000384140 107 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AL080315.1-201ENST00000406055 466 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 Y_RNA.594-201ENST00000410373 140 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC099677.1-201ENST00000420575 175 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC008267.5-201ENST00000424928 265 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RSL24D1P6-201ENST00000426934 401 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RPL7L1P9-201ENST00000431298 745 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RPS29P10-201ENST00000439197 166 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 FABP5P13-201ENST00000452144 328 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 IFNWP4-201ENST00000453148 294 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNA5SP103-201ENST00000459503 118 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC010631.1-201ENST00000474150 156 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RPL21P103-201ENST00000479921 488 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RN7SL447P-201ENST00000494711 245 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC231760.1-201ENST00000498002 260 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 PGAM1P13-201ENST00000507497 754 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-470P-201ENST00000515954 104 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-307P-201ENST00000516743 106 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 OR8R1P-201ENST00000543943 764 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 DYNLL1P4-201ENST00000549314 266 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC113195.1-201ENST00000579952 141 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 IGHV3-29-201ENST00000604817 344 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 AC005592.1-201ENST00000566527 1640 ntBASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TRIM56Q9BRZ2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AL158163.1-201ENST00000603915 1649 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 IRF5P1-201ENST00000504852 2164 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 SNORA63.7-201ENST00000365579 123 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 SNORA16.2-201ENST00000390991 127 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AC104333.2-201ENST00000422630 192 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AC236972.1-201ENST00000433225 199 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 GAPDHP27-201ENST00000447427 1020 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 Y_RNA.670-201ENST00000516255 105 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 RNU6-699P-201ENST00000517081 110 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 SNORD116.3-201ENST00000517176 78 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 AC068446.3-201ENST00000555285 382 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 RPSAP73-201ENST00000614820 330 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 MIR7155-201ENST00000615925 56 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM56Q9BRZ2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL672167.1-204ENST00000641875 3017 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 DEFB109C-201ENST00000382575 264 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 DEFB109B-201ENST00000382656 264 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 Y_RNA.404-201ENST00000383978 102 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 SNORA70-201ENST00000384436 135 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 MIR135A2-201ENST00000384854 100 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC110754.1-201ENST00000399740 601 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL078599.1-201ENST00000402075 293 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 GNG5P5-201ENST00000420444 220 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 RPL21P109-201ENST00000422213 475 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 USMG5P1-201ENST00000425964 177 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC009238.2-201ENST00000431026 355 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL591704.1-201ENST00000432574 275 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AL161722.2-201ENST00000434731 981 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 HMGB1P12-201ENST00000438594 598 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 PTMAP6-201ENST00000439110 327 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC104472.2-201ENST00000469035 601 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC007686.1-201ENST00000488511 463 ntBASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM56Q9BRZ2 RPS4XP20-201ENST00000505751 772 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms