Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AL158163.1-201ENST00000603915 1649 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.148-201ENST00000363557 117 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.197-201ENST00000364004 102 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU1-132P-201ENST00000364300 164 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 LAP3P1-201ENST00000403648 294 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR548F4-201ENST00000408515 105 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU2-8P-201ENST00000410727 190 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 BX323014.1-201ENST00000412876 237 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 PRELID3BP11-201ENST00000414230 479 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RBMY1KP-201ENST00000423480 476 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC009965.2-201ENST00000425328 970 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 SUMO1P3-201ENST00000439961 304 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC005229.2-201ENST00000456995 399 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL35AP15-201ENST00000468042 339 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AF213884.1-201ENST00000488102 463 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RNA5SP73-201ENST00000516744 108 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 MYL12AP1-201ENST00000518490 515 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL7P20-201ENST00000520308 745 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC103843.2-201ENST00000530523 682 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC004817.2-201ENST00000561794 651 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR3138-201ENST00000585238 82 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AL160290.3-201ENST00000604869 165 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 AC018529.3-201ENST00000624212 2254 ntBASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CDK5RAP1Q96SZ6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL049780.3-201ENST00000624612 1583 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 MIR383-201ENST00000362257 73 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 RNU6-996P-201ENST00000365438 107 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SNORA63.7-201ENST00000365579 123 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 Y_RNA.373-201ENST00000365600 103 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL592114.1-201ENST00000403842 483 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 GSTM3P2-201ENST00000412746 530 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC114482.1-201ENST00000418010 247 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL157831.1-201ENST00000426134 473 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC006548.1-201ENST00000427470 102 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC091390.1-201ENST00000433904 331 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL591212.2-201ENST00000433923 257 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 GPR143P-201ENST00000434155 205 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SNRPEP4-201ENST00000435815 279 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 NUTF2P3-201ENST00000448540 384 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC073415.1-201ENST00000449240 153 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC010683.1-201ENST00000473673 378 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC105137.1-201ENST00000484355 562 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC004062.1-201ENST00000509926 645 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008958.1-201ENST00000511047 682 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC104986.1-201ENST00000517978 436 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AP003730.1-201ENST00000524605 285 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 DEFB109D-201ENST00000529497 240 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 ZNF705CP-201ENST00000530515 889 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 OR5B10P-201ENST00000532869 642 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 SNRPGP18-201ENST00000553000 214 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC011477.5-201ENST00000586571 259 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 DPPA3P3-201ENST00000603842 430 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 AL590392.1-201ENST00000604960 446 ntBASIC4.5□□□□□ -1.69
CDK5RAP1Q96SZ6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms