Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC073464.3-201ENST00000422564 712 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 SUMO1P4-201ENST00000429430 302 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.63□□□□□ -1.99
IFT140Q96RY7 RPL12P25-201ENST00000455592 494 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.63□□□□□ -1.99
IFT140Q96RY7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.63□□□□□ -1.99
IFT140Q96RY7 AC091057.2-201ENST00000602594 792 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 AL353770.2-201ENST00000620024 78 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 AC131280.1-202ENST00000624067 4211 ntBASIC2.63□□□□□ -1.99
IFT140Q96RY7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
IFT140Q96RY7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
IFT140Q96RY7 MIR517C-201ENST00000385103 95 ntBASIC2.62□□□□□ -1.99
IFT140Q96RY7 RPS3AP9-201ENST00000417027 792 ntBASIC2.62□□□□□ -1.99
IFT140Q96RY7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.62□□□□□ -1.99
IFT140Q96RY7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.62□□□□□ -1.99
IFT140Q96RY7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.62□□□□□ -1.99
IFT140Q96RY7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.62□□□□□ -1.99
IFT140Q96RY7 AL589935.2-201ENST00000616471 1231 ntBASIC2.62□□□□□ -1.99
IFT140Q96RY7 MIR6734-201ENST00000621166 68 ntBASIC2.62□□□□□ -1.99
IFT140Q96RY7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.61□□□□□ -1.99
IFT140Q96RY7 SNORA31-201ENST00000362607 130 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 RPL23AP47-201ENST00000408017 460 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 RFESDP1-201ENST00000422350 461 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 AC009965.2-201ENST00000425328 970 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.61□□□□□ -1.99
IFT140Q96RY7 AC107398.1-201ENST00000486904 505 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.61□□□□□ -1.99
IFT140Q96RY7 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.61□□□□□ -1.99
IFT140Q96RY7 AL590099.1-201ENST00000615276 138 ntBASIC2.61□□□□□ -1.99
IFT140Q96RY7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.61□□□□□ -1.99
IFT140Q96RY7 HSPE1P1-201ENST00000421494 318 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.6□□□□□ -1.99
IFT140Q96RY7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.6□□□□□ -1.99
IFT140Q96RY7 IGKV2D-36-201ENST00000518643 226 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AC022790.1-201ENST00000522872 204 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AC011604.1-201ENST00000545978 196 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AC068714.1-201ENST00000559623 800 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 MTCO3P24-201ENST00000572729 782 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AC008687.2-201ENST00000597865 520 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.6□□□□□ -1.99
IFT140Q96RY7 U73479.1-201ENST00000618062 168 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
IFT140Q96RY7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.6□□□□□ -1.99
IFT140Q96RY7 OR4G11P-202ENST00000642116 1414 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
IFT140Q96RY7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 RPL17P12-201ENST00000413391 526 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 AL136133.1-201ENST00000413694 376 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 ATP5J2P3-201ENST00000451550 258 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 RPL21P131-201ENST00000497298 483 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 MTCO3P44-201ENST00000510977 541 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 AC016957.1-201ENST00000534895 309 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 MIR3618-201ENST00000580330 88 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 AC012150.2-201ENST00000621300 544 ntBASIC2.59□□□□□ -1.99
IFT140Q96RY7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.59□□□□□ -1.99
IFT140Q96RY7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC2.58□□□□□ -2
IFT140Q96RY7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.58□□□□□ -2
IFT140Q96RY7 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.58□□□□□ -2
IFT140Q96RY7 AC092155.2-201ENST00000454675 477 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.58□□□□□ -2
IFT140Q96RY7 RNU1-92P-201ENST00000517017 135 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.58□□□□□ -2
IFT140Q96RY7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.58□□□□□ -2
IFT140Q96RY7 AC234775.3-201ENST00000564612 656 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.58□□□□□ -2
IFT140Q96RY7 KATNBL1P1-201ENST00000605192 748 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 AP000553.5-201ENST00000641933 54 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 AC093536.2-201ENST00000565257 1406 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 RNU4-51P-201ENST00000364206 140 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 RNA5SP189-201ENST00000364920 115 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 MTND1P23-201ENST00000416931 372 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 WARS2P1-201ENST00000429678 537 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.58□□□□□ -2
IFT140Q96RY7 RNU6-347P-201ENST00000516658 105 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 uc_338.12-201ENST00000616344 181 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 STMN1P1-201ENST00000617809 440 ntBASIC2.58□□□□□ -2
IFT140Q96RY7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
IFT140Q96RY7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.57□□□□□ -2
IFT140Q96RY7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
IFT140Q96RY7 AC121333.1-201ENST00000567488 2709 ntBASIC2.57□□□□□ -2
IFT140Q96RY7 AC084851.1-201ENST00000529105 249 ntBASIC2.57□□□□□ -2
IFT140Q96RY7 AC139103.1-201ENST00000534696 1030 ntBASIC2.57□□□□□ -2
IFT140Q96RY7 AL161713.1-201ENST00000555538 145 ntBASIC2.57□□□□□ -2
IFT140Q96RY7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
IFT140Q96RY7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
IFT140Q96RY7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.56□□□□□ -2
IFT140Q96RY7 AL513185.2-201ENST00000425543 193 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 AC114973.1-201ENST00000429057 632 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 RPS15AP7-201ENST00000439294 405 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 TPT1P14-201ENST00000448018 505 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.56□□□□□ -2
IFT140Q96RY7 AC034222.1-201ENST00000494052 532 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 HAUS1P1-201ENST00000505275 832 ntBASIC2.56□□□□□ -2
IFT140Q96RY7 RPL37P25-201ENST00000507308 276 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms