Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC010153.1-201ENST00000432862 727 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC073614.1-201ENST00000438690 650 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 USP9YP15-201ENST00000442391 422 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 MTCO1P19-201ENST00000443487 500 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 RN7SL98P-201ENST00000462271 300 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 ARL2BPP4-201ENST00000506854 471 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 RNA5SP519-201ENST00000516480 119 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 RNA5SP380-201ENST00000517190 98 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC004024.1-201ENST00000549244 247 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC024909.2-201ENST00000553035 286 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 MIR4443-201ENST00000585052 53 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AL606834.2-201ENST00000602954 668 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 DUXAP4-201ENST00000603046 613 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC010678.1-201ENST00000614118 713 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 AC110994.2-201ENST00000635481 492 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.56□□□□□ -1.84
NR1H4Q96RI1 FARSBP1-201ENST00000435808 1778 ntBASIC3.56□□□□□ -1.84
NR1H4Q96RI1 CUL1P1-201ENST00000509510 2425 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RNU6-1284P-201ENST00000363701 100 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RNY1P12-201ENST00000364251 105 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RNU1-39P-201ENST00000383897 165 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 MIR129-1-201ENST00000384972 72 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 FAT1P1-201ENST00000406588 507 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AC016769.2-201ENST00000414815 475 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AL589872.1-201ENST00000426602 288 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 ARPC3P1-201ENST00000437218 533 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 PGBD4P3-201ENST00000440731 581 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RPS3AP46-201ENST00000448352 682 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 MTCO2P29-201ENST00000465212 189 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 RN7SL810P-201ENST00000493031 276 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AC010587.1-201ENST00000505809 469 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 SCARNA15.2-201ENST00000516409 127 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AC068657.1-201ENST00000520807 306 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AP003122.4-201ENST00000530980 758 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 TRAV8-5-201ENST00000537369 341 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 NRBF2P1-201ENST00000587407 859 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 AC064872.1-201ENST00000604823 1072 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 PISRT1-201ENST00000626175 531 ntBASIC3.55□□□□□ -1.84
NR1H4Q96RI1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NR1H4Q96RI1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 OR1S2-201ENST00000302592 978 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RNA5SP443-201ENST00000363083 132 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RNA5SP447-201ENST00000363749 119 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RNU6-398P-201ENST00000384143 109 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AC126124.2-201ENST00000413542 321 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 BTF3L4P1-201ENST00000413813 468 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 NDUFB4P7-201ENST00000423198 363 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 SNRPEP4-201ENST00000435815 279 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RANP8-201ENST00000444720 713 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AC016696.1-201ENST00000446949 318 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AL513533.1-201ENST00000453728 415 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 NDUFA12P1-201ENST00000455914 406 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RPL23AP24-201ENST00000458203 385 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AC010631.1-201ENST00000474150 156 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RNA5SP49-201ENST00000516450 115 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 SNORA18.6-201ENST00000516792 115 ntBASIC3.54□□□□□ -1.84
NR1H4Q96RI1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms