Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC104164.3-201ENST00000467363 1258 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 RPS15AP17-201ENST00000470598 390 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 AC114981.1-201ENST00000503897 678 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.55□□□□□ -2
COL21A1Q96P44 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL21A1Q96P44 AC107982.1-201ENST00000507171 1300 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 MTCYBP16-201ENST00000509187 1129 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AL359273.1-201ENST00000510918 627 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.55□□□□□ -2
COL21A1Q96P44 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.55□□□□□ -2
COL21A1Q96P44 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.55□□□□□ -2
COL21A1Q96P44 AC022483.1-201ENST00000514020 567 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC103783.1-201ENST00000520506 373 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.55□□□□□ -2
COL21A1Q96P44 HSPE1P20-201ENST00000538133 289 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.55□□□□□ -2
COL21A1Q96P44 MIR3912-201ENST00000577566 105 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC011260.1-201ENST00000578420 472 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 MIR5708-201ENST00000579723 85 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 ELOCP29-201ENST00000588193 334 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC013444.2-201ENST00000603317 787 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC008277.2-201ENST00000605196 797 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 AC253576.2-201ENST00000618815 580 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
COL21A1Q96P44 OR1S1-201ENST00000624470 978 ntBASIC2.55□□□□□ -2
COL21A1Q96P44 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL21A1Q96P44 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
COL21A1Q96P44 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 CDR1-202ENST00000625883 1485 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AL356473.1-201ENST00000406203 1408 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 FRG1BP-201ENST00000278882 761 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 RNU6-799P-201ENST00000363567 107 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 SNORA25.6-201ENST00000364121 118 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 RNU2-43P-201ENST00000410306 190 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 CCDC58P2-201ENST00000417131 366 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.54□□□□□ -2
COL21A1Q96P44 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 NDUFB4P6-201ENST00000436819 366 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC092427.1-201ENST00000439177 601 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC093155.1-201ENST00000440164 826 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 MTND2P20-201ENST00000440805 661 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC025750.2-201ENST00000442609 450 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC079776.3-201ENST00000450665 370 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 MTCO3P11-201ENST00000455103 774 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC092798.1-201ENST00000458542 409 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC104472.2-201ENST00000469035 601 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 SETP11-201ENST00000473027 690 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC015908.1-201ENST00000478739 476 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 KC877373.1-201ENST00000479066 408 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC069528.1-202ENST00000482888 637 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 SNORA70.16-201ENST00000516390 95 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.54□□□□□ -2
COL21A1Q96P44 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL21A1Q96P44 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.54□□□□□ -2
COL21A1Q96P44 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.54□□□□□ -2
COL21A1Q96P44 AC023825.1-201ENST00000566704 1030 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC138915.2-201ENST00000569776 97 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC015688.2-201ENST00000584523 262 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.54□□□□□ -2
COL21A1Q96P44 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 AL445435.1-201ENST00000604232 665 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC093673.2-201ENST00000609674 331 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 BX664608.1-201ENST00000610519 487 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC013412.1-201ENST00000610687 192 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 MIR7106-201ENST00000612419 65 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.54□□□□□ -2
COL21A1Q96P44 MIR4275-201ENST00000636486 87 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
COL21A1Q96P44 AC009812.4-201ENST00000569134 1805 ntBASIC2.54□□□□□ -2
COL21A1Q96P44 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
COL21A1Q96P44 AC005539.1-201ENST00000443768 1479 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
COL21A1Q96P44 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.53□□□□□ -2
COL21A1Q96P44 RNU6-1027P-201ENST00000383998 107 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 MIR493-201ENST00000385254 89 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 AL603865.2-201ENST00000401679 213 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 RAP1BP1-201ENST00000412709 553 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 MTATP6P27-201ENST00000416987 621 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 MTND4P3-201ENST00000417829 541 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 AC007435.1-201ENST00000421086 415 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
COL21A1Q96P44 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.53□□□□□ -2
COL21A1Q96P44 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
COL21A1Q96P44 MTND4P6-201ENST00000438297 472 ntBASIC2.53□□□□□ -2
COL21A1Q96P44 AC090453.1-201ENST00000495560 436 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms