Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC005951.2-201ENST00000576282 495 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC005498.1-201ENST00000592125 465 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC020895.1-201ENST00000595362 272 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL035413.2-201ENST00000604801 525 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL450336.1-201ENST00000605180 586 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC144521.1-201ENST00000607148 956 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC019176.2-201ENST00000611579 315 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 U4.6-201ENST00000621618 127 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AL356596.1-201ENST00000624230 379 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 AP003399.1-201ENST00000637534 361 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.11□□□□□ -1.91
PTP4A1Q93096 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PTP4A1Q93096 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
PTP4A1Q93096 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTP4A1Q93096 MTND5P7-201ENST00000413558 1798 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTP4A1Q93096 MFSD8-233ENST00000641482 4860 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNA5SP88-201ENST00000365560 109 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTP4A1Q93096 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNU1-39P-201ENST00000383897 165 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNU6-217P-201ENST00000384164 104 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC007066.1-201ENST00000392902 381 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RN7SKP220-201ENST00000410611 288 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNA5SP107-201ENST00000411358 122 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RAP1BP1-201ENST00000412709 553 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC245291.1-201ENST00000419501 328 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL714022.1-201ENST00000439897 151 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTP4A1Q93096 DDX3P2-201ENST00000446138 111 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 GAPDHP27-201ENST00000447427 1020 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNU7-59P-201ENST00000459101 61 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 SNORD11.1-201ENST00000459482 85 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC008481.1-201ENST00000463278 396 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC116337.2-201ENST00000477662 156 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 KC877373.1-201ENST00000479066 408 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 LARP1BP2-201ENST00000486594 519 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC034244.1-201ENST00000507687 207 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNU1-95P-201ENST00000516357 160 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 RNU1-128P-201ENST00000516704 160 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC087373.1-201ENST00000524920 491 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC023538.1-201ENST00000534576 736 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC068135.2-201ENST00000569293 1028 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC008739.2-201ENST00000597006 317 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 BNIP3P23-201ENST00000599655 511 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC011458.1-201ENST00000604034 617 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC092953.2-201ENST00000608000 699 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AC239868.4-201ENST00000608318 671 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL121772.2-201ENST00000614331 297 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL391262.2-201ENST00000622466 494 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 AL356863.1-201ENST00000623378 1080 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 MTND1P37-201ENST00000636562 264 ntBASIC3.1□□□□□ -1.91
PTP4A1Q93096 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.1□□□□□ -1.91
PTP4A1Q93096 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 ZNF876P-202ENST00000398732 1485 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC008264.2-201ENST00000610193 3731 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC032011.1-201ENST00000611703 1549 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTP4A1Q93096 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL359837.1-201ENST00000381357 287 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 RN7SKP123-201ENST00000410732 291 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 PIGPP2-201ENST00000411569 458 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 ATP5A1P2-201ENST00000412323 255 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 AL445584.1-201ENST00000431451 330 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 MTND1P32-201ENST00000433043 938 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 UBE2FP3-201ENST00000436366 524 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 RSU1P2-202ENST00000437884 485 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.09□□□□□ -1.91
PTP4A1Q93096 FAM103A2P-201ENST00000444122 354 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 ELOCP30-201ENST00000447108 299 ntBASIC3.09□□□□□ -1.91
PTP4A1Q93096 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms