Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC092851.1-201ENST00000535964 478 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL161670.1-201ENST00000554348 137 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC008507.1-201ENST00000587506 734 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL445493.3-201ENST00000619568 477 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC090229.1-201ENST00000590983 1609 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.403-201ENST00000383977 101 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC092638.1-201ENST00000411966 1275 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 OR2X1P-201ENST00000421144 687 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC093801.2-201ENST00000503966 1050 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 RMST_8.1-201ENST00000610287 165 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MIR6078-201ENST00000611069 100 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AL157834.3-201ENST00000615543 103 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 AC138627.1-204ENST00000641894 765 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MTND5P26-201ENST00000426018 1752 ntBASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
SYNE2Q8WXH0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC080078.3-201ENST00000605407 463 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RAC1P3-201ENST00000416129 580 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC008126.1-201ENST00000549019 480 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL353748.2-201ENST00000622148 471 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC005336.3-201ENST00000623833 2679 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 CCT4P2-201ENST00000233836 1548 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 ZNF299P-201ENST00000406845 1804 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC109315.1-201ENST00000584143 1347 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNU6-112P-201ENST00000363599 104 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 MTCO2P17-201ENST00000424336 677 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL591212.2-201ENST00000433923 257 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC108059.3-201ENST00000456388 214 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AP000852.1-201ENST00000472460 573 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 CENPUP1-201ENST00000526649 1202 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC073387.2-201ENST00000604797 784 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SNORA36.1-201ENST00000363424 132 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNA5SP27-201ENST00000363839 119 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL596275.2-204ENST00000641628 552 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL596275.2-206ENST00000641957 626 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 VPS26BP1-201ENST00000417155 755 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL161651.1-201ENST00000440882 223 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SNORD57-201ENST00000448188 72 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SNORA64.4-201ENST00000516632 81 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AL391261.3-201ENST00000557194 520 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNA5SP368-201ENST00000364298 116 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNU1-100P-201ENST00000365255 165 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNU6-55P-201ENST00000411092 107 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 RNU6-954P-201ENST00000411355 107 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 SEPT14P1-201ENST00000458703 648 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC244517.12-201ENST00000623581 663 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 AC006484.1-201ENST00000435086 1884 ntBASIC0.75□□□□□ -2.29
SYNE2Q8WXH0 Y_RNA.28-201ENST00000362554 111 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNU6-336P-201ENST00000364891 107 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNU6-1064P-201ENST00000410626 104 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNA5SP25-201ENST00000410815 110 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 ARL5AP3-201ENST00000439327 386 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MTCO1P48-201ENST00000448024 1096 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 OR11H5P-202ENST00000641612 1325 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 SNORD114-15-201ENST00000364687 72 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RNU4-91P-201ENST00000364778 135 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 SNORA67.6-201ENST00000391093 99 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 USP12PY-201ENST00000427677 1064 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 RPL37P21-201ENST00000435890 276 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AP004217.1-201ENST00000480579 346 ntBASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC0.74□□□□□ -2.29
SYNE2Q8WXH0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms