Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 Y_RNA.483-201ENST00000384380 101 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RNU6-729P-201ENST00000384399 107 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 MT-TW-201ENST00000387382 68 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 PVALB-202ENST00000404171 422 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RN7SKP16-201ENST00000410180 299 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 PIGPP3-201ENST00000425307 415 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RPL36AP6-201ENST00000435770 321 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AC112492.4-201ENST00000456549 352 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RPS17P2-201ENST00000461663 408 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RPL23AP55-201ENST00000498163 452 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 GMPSP1-201ENST00000514075 579 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RNU6-1023P-201ENST00000516137 106 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 RNU6-307P-201ENST00000516743 106 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 HSPE1P20-201ENST00000538133 289 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 NDUFB4P11-201ENST00000560510 395 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 AC007179.3-201ENST00000604976 235 ntBASIC8.42□□□□□ -1.06
TRIM41Q8WV44 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
TRIM41Q8WV44 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 RNU5E-6P-201ENST00000365574 115 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 RNU6-128P-201ENST00000383976 107 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 MIR1252-201ENST00000408861 65 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 Z99755.1-201ENST00000414048 380 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 RPL21P109-201ENST00000422213 475 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 AC139712.2-201ENST00000424302 339 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 RNU6-323P-201ENST00000521915 107 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 RANP3-201ENST00000530970 276 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 AC040958.1-201ENST00000561102 201 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 AL138721.1-201ENST00000616756 179 ntBASIC8.41□□□□□ -1.06
TRIM41Q8WV44 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC8.41□□□□□ -1.06
TRIM41Q8WV44 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 Y_RNA.14-201ENST00000362415 103 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 RNA5SP432-201ENST00000362480 116 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 Y_RNA.314-201ENST00000365114 102 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 SNORD14.1-201ENST00000365609 90 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC069218.2-201ENST00000411665 344 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC243428.1-201ENST00000421099 264 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 USP9YP30-201ENST00000430729 455 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC099799.1-201ENST00000439809 192 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AL691482.1-201ENST00000453255 87 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC005912.1-201ENST00000495392 255 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 RNU6-138P-201ENST00000515952 107 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 Z98751.3-201ENST00000604447 521 ntBASIC8.4□□□□□ -1.06
TRIM41Q8WV44 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
TRIM41Q8WV44 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC8.4□□□□□ -1.07
TRIM41Q8WV44 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC8.4□□□□□ -1.07
TRIM41Q8WV44 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
TRIM41Q8WV44 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 ZNF734P-201ENST00000419494 1534 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC004656.1-201ENST00000568479 4951 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 SNORD82-201ENST00000365530 70 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 SNORD70.1-201ENST00000391007 85 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AL445529.1-201ENST00000398713 389 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 RPL21P1-201ENST00000399532 476 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 COX5BP7-201ENST00000414780 274 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC093578.1-201ENST00000415219 368 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 RPL7P37-201ENST00000425095 738 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AL133244.1-201ENST00000456007 258 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 RPS23P3-201ENST00000470993 430 ntBASIC8.39□□□□□ -1.07
TRIM41Q8WV44 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC8.39□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms