Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 RNA5SP325-201ENST00000363756 130 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 MORF4L1P7-201ENST00000426038 703 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC024560.3-201ENST00000608482 349 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AL121594.1-201ENST00000475906 575 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 BTF3P12-201ENST00000519620 469 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 RPS3AP23-202ENST00000574601 686 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC095038.3-201ENST00000634439 195 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 MTND4P23-201ENST00000447723 1363 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 ZNF33CP-201ENST00000432492 2030 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 Y_RNA.178-201ENST00000363832 102 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 RPS3AP9-201ENST00000417027 792 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC015720.1-201ENST00000565251 277 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 uc_338.20-201ENST00000621563 178 ntBASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ALMS1Q8TCU4 AC019129.1-201ENST00000403786 261 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 PGBD4P3-201ENST00000440731 581 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 MTCO3P24-201ENST00000572729 782 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AL390240.1-201ENST00000612950 384 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AP000648.3-201ENST00000623539 4507 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC121333.1-201ENST00000567488 2709 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 RNA5SP37-201ENST00000365420 130 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 RNU4-65P-201ENST00000410473 140 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC117532.1-201ENST00000514638 323 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC011604.1-201ENST00000545978 196 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AL512598.1-201ENST00000610158 273 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AL353746.1-201ENST00000566293 6881 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 MTND5P35-201ENST00000557537 1720 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 RPL23AP7-203ENST00000449021 469 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 TOMM22P6-201ENST00000465035 409 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 MTCYBP17-201ENST00000503579 789 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC010928.2-201ENST00000588017 287 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
ALMS1Q8TCU4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 BX322784.1-201ENST00000455793 1077 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC022493.1-201ENST00000492984 337 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 PTP4A1P6-201ENST00000531034 478 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AL356280.1-201ENST00000603614 379 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 BX649567.1-201ENST00000642071 1134 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 ANAPC10P1-201ENST00000395991 556 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 RPL30P3-201ENST00000424262 333 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 IPO7P1-201ENST00000442031 636 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC087241.2-201ENST00000535801 324 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC090751.1-201ENST00000566966 267 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 SNRPGP15-201ENST00000600149 222 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AL109653.1-201ENST00000603091 248 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC126118.1-201ENST00000607744 628 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AL359740.1-201ENST00000624340 592 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 RNU6-1027P-201ENST00000383998 107 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AMD1P1-201ENST00000457220 922 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 AC087808.1-201ENST00000520501 361 ntBASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
ALMS1Q8TCU4 RNA5SP139-201ENST00000364340 117 ntBASIC1.18□□□□□ -2.22
ALMS1Q8TCU4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms