Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RPL21P131-201ENST00000497298 483 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC119751.5-201ENST00000514077 770 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 RPL7P20-201ENST00000520308 745 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC087276.1-201ENST00000529659 480 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC125611.2-201ENST00000551907 647 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC015688.2-201ENST00000584523 262 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 RPAP2P1-201ENST00000603626 1168 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC019159.1-201ENST00000605094 187 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 SNHG22-203ENST00000617833 660 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC009812.4-201ENST00000569134 1805 ntBASIC2.19□□□□□ -2.06
ZIC4Q8N9L1 AC069528.2-201ENST00000624849 1991 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 SNORD56.5-201ENST00000364281 72 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 MIR217-201ENST00000384817 110 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AL356320.2-201ENST00000417263 507 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 BEND7P1-201ENST00000422058 457 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 MTCO2P17-201ENST00000424336 677 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 Z93242.1-201ENST00000427102 353 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 MTCYBP32-201ENST00000427945 1084 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 FCF1P1-201ENST00000432690 571 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC092573.2-201ENST00000434546 243 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 CR769767.1-201ENST00000436337 346 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 MOB1AP2-201ENST00000446060 614 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AL049714.1-201ENST00000466686 347 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 RPL23AP45-201ENST00000476406 468 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 RPL30P5-201ENST00000494923 336 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 COX7A2P2-201ENST00000505291 250 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC027338.1-201ENST00000514840 825 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC027309.2-201ENST00000520566 192 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 OR8K2P-201ENST00000524645 927 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 OR5BN1P-201ENST00000532955 829 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 SNRPGP1-201ENST00000553864 222 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 HMGB1P14-201ENST00000557424 591 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC090695.1-201ENST00000561269 1222 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 RPL23AP84-201ENST00000571193 464 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 BNIP3P24-201ENST00000593398 557 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 DUXAP3-201ENST00000603616 594 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AP000238.1-201ENST00000608759 426 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AL161629.2-201ENST00000615347 275 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 MIR6852-201ENST00000621699 66 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 AC110079.1-202ENST00000635213 138 ntBASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ZIC4Q8N9L1 ZNF519P1-201ENST00000449011 1626 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ANKRD36P1-201ENST00000344424 659 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AL672167.1-206ENST00000356293 943 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 DEFA7P-201ENST00000382676 285 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RNU6-657P-201ENST00000383904 107 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 SNORA67.4-201ENST00000384688 142 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RNU2-43P-201ENST00000410306 190 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RNU2-47P-201ENST00000410649 186 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AL513477.1-202ENST00000417061 214 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 MTCYBP15-201ENST00000433123 1127 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 VN1R10P-201ENST00000447106 875 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AL109741.2-201ENST00000455561 343 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC092757.1-201ENST00000467293 467 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RPL31P60-201ENST00000478450 367 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC114781.4-201ENST00000513707 639 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC109329.2-201ENST00000519658 482 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 ZNF971P-201ENST00000562068 1249 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC008739.2-201ENST00000597006 317 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC098483.2-201ENST00000603158 454 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AL160237.3-201ENST00000604114 1013 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC007621.1-201ENST00000604544 437 ntBASIC2.17□□□□□ -2.06
ZIC4Q8N9L1 AC091946.2-201ENST00000606105 291 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms