Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 Y_RNA.704-201ENST00000516851 102 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AL121579.1-201ENST00000555129 305 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC107954.1-201ENST00000565906 727 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 MIR5047-201ENST00000579212 100 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AL391813.2-201ENST00000609113 322 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC006338.1-201ENST00000618453 749 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 AC091953.2-201ENST00000623979 160 ntBASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLIP4Q8N3C7 MTCO1P24-201ENST00000515438 1558 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 OR5J1P-201ENST00000313544 939 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RPL32P3-201ENST00000359025 275 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNU5E-1-201ENST00000362477 120 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNU6-1085P-201ENST00000363576 107 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 SNORD6-201ENST00000365444 73 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNU6-356P-201ENST00000384140 107 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RN7SKP285-201ENST00000410137 318 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNA5SP317-201ENST00000410176 116 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNA5SP311-201ENST00000411290 116 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL109913.1-201ENST00000421173 514 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 USP9YP15-201ENST00000442391 422 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC112653.1-201ENST00000443851 386 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL671855.1-201ENST00000446875 1203 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC009220.1-201ENST00000451614 275 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 MTND2P24-201ENST00000453434 806 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 MTND1P12-201ENST00000455231 147 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RPS4XP10-201ENST00000465034 731 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC110792.1-201ENST00000491826 472 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC023194.1-201ENST00000493084 308 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC069439.1-201ENST00000494739 167 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC010587.1-201ENST00000505809 469 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RN7SKP122-201ENST00000515923 296 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNA5SP315-201ENST00000516340 116 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RNA5SP312-201ENST00000517068 116 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AP000907.2-201ENST00000530827 353 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL512360.1-201ENST00000555346 234 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL356432.3-201ENST00000568952 465 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC012507.3-201ENST00000603556 477 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AL391646.1-201ENST00000603860 190 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC010680.3-201ENST00000604215 520 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 AC008277.2-201ENST00000605196 797 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 RMST_8.1-201ENST00000610287 165 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 MIR6798-201ENST00000612887 67 ntBASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.55□□□□□ -1.84
CLIP4Q8N3C7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 SNORA70C-201ENST00000384538 135 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 Y_RNA.573-201ENST00000384763 105 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 MIR141-201ENST00000384975 95 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 MIR199A2-201ENST00000385289 110 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 MTCO1P20-201ENST00000425366 358 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 MTCO2P19-201ENST00000427513 598 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AL049734.2-201ENST00000441066 616 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AL136380.1-201ENST00000447970 162 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 PPIAP3-201ENST00000450588 505 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
CLIP4Q8N3C7 AL049830.2-201ENST00000480072 201 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms