Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 MIR4648-201ENST00000580107 72 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC006329.2-201ENST00000611491 394 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC011330.2-201ENST00000621680 635 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.65□□□□□ -1.83
NPHP3Q7Z494 AC026634.1-201ENST00000634369 198 ntBASIC3.65□□□□□ -1.83
NPHP3Q7Z494 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 ZNF876P-202ENST00000398732 1485 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 Y_RNA.192-201ENST00000363977 102 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 RNU6-560P-201ENST00000364007 108 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AL135786.1-201ENST00000415892 214 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 RAD23BP2-201ENST00000416003 1207 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 ELOCP9-201ENST00000418624 239 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 ARF4P2-201ENST00000430209 526 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 Z73417.1-201ENST00000447373 778 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 RPL23AP62-201ENST00000463396 453 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 MTCO2P15-201ENST00000532655 656 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 DEFB122-202ENST00000569013 197 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC012182.1-201ENST00000570133 895 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC128687.1-201ENST00000605304 619 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC091946.2-201ENST00000606105 291 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC007349.4-201ENST00000608114 532 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC006023.2-201ENST00000609916 167 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC087683.2-201ENST00000611384 326 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 AC010338.1-201ENST00000621823 717 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 MKKS-204ENST00000639674 192 ntBASIC3.64□□□□□ -1.83
NPHP3Q7Z494 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NPHP3Q7Z494 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 Y_RNA.465-201ENST00000384293 102 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RN7SKP223-201ENST00000410582 62 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 COX7BP2-201ENST00000437976 242 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 HMGB1P12-201ENST00000438594 598 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AL591719.1-201ENST00000444669 744 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 IFNA11P-201ENST00000446352 526 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 MTCO1P48-201ENST00000448024 1096 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RPS24P6-201ENST00000452670 400 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RPS20P24-201ENST00000457473 361 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC003982.1-202ENST00000469928 248 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC013828.1-201ENST00000481845 158 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 OR4G11P-201ENST00000492842 939 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC112673.1-201ENST00000513168 575 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RNA5SP320-201ENST00000516263 124 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RNU6-1261P-201ENST00000517194 104 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC005832.3-201ENST00000537929 631 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 MTCYBP27-201ENST00000555160 670 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 BNIP3P26-201ENST00000600827 554 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 XIAPP1-201ENST00000603162 600 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 DUXAP3-201ENST00000603616 594 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC011468.4-201ENST00000603942 409 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC103710.3-201ENST00000608157 948 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AP000770.2-201ENST00000623694 100 ntBASIC3.63□□□□□ -1.83
NPHP3Q7Z494 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NPHP3Q7Z494 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 MTND5P19-201ENST00000424872 1794 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
NPHP3Q7Z494 SNORD62.1-201ENST00000362541 86 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 SNORA51.6-201ENST00000384151 125 ntBASIC3.62□□□□□ -1.83
NPHP3Q7Z494 MIR764-201ENST00000390811 85 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms