Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 RNY4P24-201ENST00000362735 96 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 Y_RNA.97-201ENST00000363094 102 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 CD24P4-201ENST00000382840 243 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 SNORA5A-201ENST00000384111 134 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AL389915.1-201ENST00000422463 466 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AL390023.1-201ENST00000428836 262 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 MED14P1-201ENST00000430517 648 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AL365184.2-201ENST00000431139 435 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 RPL37P21-201ENST00000435890 276 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 LARP1BP3-201ENST00000437229 869 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 RPL7P36-201ENST00000444633 681 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 ZNF114P1-201ENST00000453500 292 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC091179.1-201ENST00000461606 579 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC006499.5-201ENST00000505037 514 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC026784.1-201ENST00000507986 352 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC006445.2-201ENST00000510061 472 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC087373.1-201ENST00000524920 491 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AL121576.1-201ENST00000556055 276 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC099489.2-201ENST00000574976 260 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 Z99497.2-201ENST00000603634 310 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AL158211.4-201ENST00000606988 584 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC091965.5-201ENST00000624785 342 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 AC012442.3-202ENST00000636742 206 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 MIR3974-201ENST00000637126 96 ntBASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
NUP54Q7Z3B4 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NUP54Q7Z3B4 AC012321.1-201ENST00000561622 1588 ntBASIC3.34□□□□□ -1.88
NUP54Q7Z3B4 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 SDAD1P2-201ENST00000441308 2028 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 RNA5SP124-201ENST00000362739 110 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 RNU6-283P-201ENST00000364788 107 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 RNU6-114P-201ENST00000384704 105 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 U8.14-201ENST00000390843 143 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AL359704.1-201ENST00000411586 781 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 TPMTP3-201ENST00000411928 735 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 ATG3P1-201ENST00000419507 911 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC109583.1-201ENST00000432156 268 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 NDUFB1P1-201ENST00000435191 180 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MTND1P30-201ENST00000441241 901 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 TRIM60P18-201ENST00000441518 828 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 TXNP1-201ENST00000441872 371 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC093392.2-201ENST00000450682 337 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC007967.1-201ENST00000455422 1159 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AP1S2P1-201ENST00000457344 379 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 SNORA84-201ENST00000459229 133 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MTND3P7-201ENST00000474435 343 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC109486.1-201ENST00000486833 374 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 GTF2IP22-201ENST00000554443 182 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC091489.2-201ENST00000566263 604 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MIR3158-1-201ENST00000583596 81 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 UBE2L4-201ENST00000587688 464 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC006077.1-201ENST00000604746 343 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC092354.1-201ENST00000606057 376 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AL158801.5-201ENST00000623123 465 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC091931.1-201ENST00000623488 728 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC007494.3-201ENST00000624660 743 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 CCT4P2-201ENST00000233836 1548 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 PWAR6-201ENST00000552334 4618 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MFSD8-233ENST00000641482 4860 ntBASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NUP54Q7Z3B4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms