Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PPP4R4Q6NUP7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 HSPE1P11-201ENST00000339579 310 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 RNU5E-6P-201ENST00000365574 115 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 Y_RNA.619-201ENST00000410951 90 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC016397.1-201ENST00000412463 242 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 MTCO2P19-201ENST00000427513 598 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 RPL23AP30-201ENST00000432419 501 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC092573.2-201ENST00000434546 243 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC093392.2-201ENST00000450682 337 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC007537.2-201ENST00000472093 511 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 HMGB1P29-201ENST00000505659 499 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC010460.1-201ENST00000507087 466 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 RN7SKP258-201ENST00000517151 304 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 IGLVIV-65-201ENST00000517313 360 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 RAB9BP1-201ENST00000519581 626 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AP001781.1-201ENST00000530977 207 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC128657.1-201ENST00000549459 145 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AL845331.3-202ENST00000562856 261 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC020914.4-201ENST00000597690 277 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 AC244505.7-201ENST00000599675 272 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 U6.98-201ENST00000637157 84 ntBASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PPP4R4Q6NUP7 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.15□□□□□ -1.74
PPP4R4Q6NUP7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
PPP4R4Q6NUP7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
PPP4R4Q6NUP7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AL138878.1-201ENST00000405131 347 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC137499.1-201ENST00000427602 88 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 OR2AS1P-201ENST00000427827 319 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC093106.2-201ENST00000428212 385 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 FCF1P1-201ENST00000432690 571 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 HMGN2P20-201ENST00000437531 273 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 MTND1P1-201ENST00000445453 368 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 SNORD97-201ENST00000459187 142 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 RPS3AP14-201ENST00000483907 780 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 RPL32P34-201ENST00000486380 400 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 RPL36AP41-201ENST00000493820 306 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC025554.1-201ENST00000505641 188 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 IGKV1-32-201ENST00000519290 311 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC011979.2-201ENST00000527568 352 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 FAM92A1P1-201ENST00000528023 890 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AP002360.4-201ENST00000606980 481 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 Z98200.1-201ENST00000607298 470 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC006338.2-201ENST00000616864 791 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC091152.2-201ENST00000591628 2569 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC007256.1-201ENST00000392253 2765 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 AC007785.2-201ENST00000598627 1916 ntBASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.15□□□□□ -1.75
PPP4R4Q6NUP7 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 LINC00622-201ENST00000562811 1570 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 FAM35DP-201ENST00000323387 2712 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 OR4K15-201ENST00000305051 1216 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RNVU1-6-201ENST00000364688 164 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 Y_RNA.296-201ENST00000364930 108 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RNU6-741P-201ENST00000383889 107 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 SNORA56-201ENST00000383966 129 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 RPL21P17-201ENST00000397467 475 ntBASIC4.14□□□□□ -1.75
PPP4R4Q6NUP7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms