Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC109327.1-201ENST00000471666 403 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSRP1Q08945 RN7SL481P-201ENST00000477764 299 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AF213884.1-201ENST00000488102 463 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.87□□□□□ -1.63
SSRP1Q08945 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RPL39P36-201ENST00000490784 156 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.87□□□□□ -1.63
SSRP1Q08945 RPL38P4-201ENST00000502376 214 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.87□□□□□ -1.63
SSRP1Q08945 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.87□□□□□ -1.63
SSRP1Q08945 MIR4775-201ENST00000581168 75 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 MIR4697-201ENST00000582977 78 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 SNORD84-203ENST00000584275 78 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.87□□□□□ -1.63
SSRP1Q08945 AP001029.3-201ENST00000588063 596 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AF038458.1-201ENST00000588406 262 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.87□□□□□ -1.63
SSRP1Q08945 AL161729.3-201ENST00000603533 673 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC010680.3-201ENST00000604215 520 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC064801.1-201ENST00000612025 407 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AL353748.2-201ENST00000622148 471 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.87□□□□□ -1.63
SSRP1Q08945 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.87□□□□□ -1.63
SSRP1Q08945 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSRP1Q08945 BDP1P-201ENST00000582658 1990 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSRP1Q08945 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.87□□□□□ -1.63
SSRP1Q08945 AL365440.1-201ENST00000436135 2167 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SSRP1Q08945 AC073544.1-201ENST00000600110 1595 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 AC004972.1-201ENST00000623934 2209 ntBASIC4.87□□□□□ -1.63
SSRP1Q08945 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 Y_RNA.72-201ENST00000362894 103 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 RNU6-188P-201ENST00000364207 107 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 SNORA23-201ENST00000365128 182 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 U3.15-201ENST00000365398 212 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 RNU6-1009P-201ENST00000390996 107 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL359634.1-202ENST00000404721 284 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AC244098.2-201ENST00000422068 99 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 MTCYBP8-201ENST00000422855 651 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 PPP1R11P2-201ENST00000423543 382 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 RPL36AP53-201ENST00000432891 316 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.86□□□□□ -1.63
SSRP1Q08945 RN7SL432P-201ENST00000484057 298 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 EIF4EP3-201ENST00000498782 656 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 HMGN1P12-201ENST00000499125 195 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 IFITM8P-201ENST00000522529 394 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC103843.2-201ENST00000530523 682 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 OR5AL2P-201ENST00000532185 920 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.86□□□□□ -1.63
SSRP1Q08945 BNIP3P5-201ENST00000562290 498 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.86□□□□□ -1.63
SSRP1Q08945 FGF7P1-201ENST00000582820 288 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
SSRP1Q08945 IPO5P1-202ENST00000600039 287 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.6-201ENST00000603753 252 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.11-201ENST00000604059 253 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AC008162.1-201ENST00000604718 254 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.1-201ENST00000604752 252 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.5-201ENST00000605253 252 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.12-201ENST00000605291 253 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.8-201ENST00000605353 252 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL670379.7-201ENST00000605823 252 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL359314.1-201ENST00000616913 261 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC110801.1-201ENST00000623590 212 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 AL133243.3-201ENST00000617415 3004 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.86□□□□□ -1.63
SSRP1Q08945 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
SSRP1Q08945 AC011266.1-201ENST00000624119 3569 ntBASIC4.86□□□□□ -1.63
SSRP1Q08945 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSRP1Q08945 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.85□□□□□ -1.63
SSRP1Q08945 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSRP1Q08945 RNU1-94P-201ENST00000362627 173 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 RPL7AP73-201ENST00000413490 353 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 RAC1P6-201ENST00000423911 575 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 COX6B1P7-201ENST00000430845 235 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 MTND3P23-201ENST00000431980 347 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.85□□□□□ -1.63
SSRP1Q08945 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.85□□□□□ -1.63
SSRP1Q08945 RPS11P1-201ENST00000451072 473 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 RN7SL585P-201ENST00000470538 280 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC022795.1-201ENST00000473808 480 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC010631.1-201ENST00000474150 156 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC091167.1-201ENST00000492017 396 ntBASIC4.85□□□□□ -1.63
SSRP1Q08945 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms