Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 AC108479.2-201ENST00000617314 601 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 Z69908.1-201ENST00000622603 247 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
RPS3AP61247 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RPS3AP61247 OR4G2P-202ENST00000641004 1759 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RPS3AP61247 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPS3AP61247 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RPS3AP61247 FGF7P2-201ENST00000332473 296 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RPS3AP61247 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPS3AP61247 RNU1-39P-201ENST00000383897 165 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RPS3AP61247 RNU6-1197P-201ENST00000391183 107 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 FAT1P1-201ENST00000406588 507 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RNU2-62P-201ENST00000410868 191 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RNA5SP107-201ENST00000411358 122 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RPS7P13-201ENST00000413955 498 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC006366.1-201ENST00000422002 759 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.56□□□□□ -1.84
RPS3AP61247 SETP8-201ENST00000435341 628 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 SETP5-201ENST00000437270 562 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.56□□□□□ -1.84
RPS3AP61247 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.56□□□□□ -1.84
RPS3AP61247 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.56□□□□□ -1.84
RPS3AP61247 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.56□□□□□ -1.84
RPS3AP61247 AC099563.1-201ENST00000456086 418 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AL359385.1-201ENST00000456509 365 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RPL31P3-201ENST00000458430 332 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RNA5SP310-201ENST00000459084 116 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 RPS27AP1-201ENST00000475545 471 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.56□□□□□ -1.84
RPS3AP61247 AP003467.2-201ENST00000520175 319 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC123904.3-201ENST00000547218 814 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.56□□□□□ -1.84
RPS3AP61247 AC012414.6-201ENST00000568241 401 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC005951.2-201ENST00000576282 495 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.56□□□□□ -1.84
RPS3AP61247 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.56□□□□□ -1.84
RPS3AP61247 AC091167.4-201ENST00000605079 184 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC008277.2-201ENST00000605196 797 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC097065.2-201ENST00000608159 533 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AL391813.2-201ENST00000609113 322 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC108747.1-201ENST00000609508 535 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 BX664608.1-201ENST00000610519 487 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC025594.3-201ENST00000613068 790 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AL158063.1-201ENST00000615349 536 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC090132.2-201ENST00000615881 347 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 uc_338.12-201ENST00000616344 181 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 AC002076.2-201ENST00000617362 122 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 SNHG22-203ENST00000617833 660 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 U6.98-201ENST00000637157 84 ntBASIC3.56□□□□□ -1.84
RPS3AP61247 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RPS3AP61247 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.56□□□□□ -1.84
RPS3AP61247 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS3AP61247 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS3AP61247 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS3AP61247 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RPS3AP61247 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RPS3AP61247 Y_RNA.77-201ENST00000362962 107 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 ELOCP17-201ENST00000414751 326 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 TMEM167AP1-201ENST00000423409 219 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS3AP61247 MTND1P28-201ENST00000435623 950 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 RPL17P49-201ENST00000443728 411 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 TAF9P1-201ENST00000445421 515 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC006539.3-201ENST00000454258 129 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 TAF9P2-201ENST00000454958 515 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC093534.1-201ENST00000504977 132 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 RNU6-64P-201ENST00000517119 105 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 PAICSP4-201ENST00000517543 1253 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS3AP61247 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC124947.2-202ENST00000552735 133 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS3AP61247 AL157394.1-201ENST00000562983 1224 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.55□□□□□ -1.84
RPS3AP61247 BNIP3P8-201ENST00000597863 560 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 AC004908.3-201ENST00000610248 625 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 AC004696.1-201ENST00000614345 607 ntBASIC3.55□□□□□ -1.84
RPS3AP61247 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.55□□□□□ -1.84
RPS3AP61247 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms