Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.89□□□□□ -1.95
CASP4P49662 SNORA70.16-201ENST00000516390 95 ntBASIC2.89□□□□□ -1.95
CASP4P49662 SNORA31.21-201ENST00000517180 77 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AC103783.1-201ENST00000520506 373 ntBASIC2.89□□□□□ -1.95
CASP4P49662 MTND2P7-201ENST00000521337 640 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AC100870.1-201ENST00000522035 505 ntBASIC2.89□□□□□ -1.95
CASP4P49662 OR10V3P-201ENST00000525712 725 ntBASIC2.89□□□□□ -1.95
CASP4P49662 DEFB108D-201ENST00000527787 222 ntBASIC2.89□□□□□ -1.95
CASP4P49662 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.89□□□□□ -1.95
CASP4P49662 SETP2-201ENST00000553886 926 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.89□□□□□ -1.95
CASP4P49662 ELOCP29-201ENST00000588193 334 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.89□□□□□ -1.95
CASP4P49662 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.89□□□□□ -1.95
CASP4P49662 AL022067.1-201ENST00000602426 454 ntBASIC2.89□□□□□ -1.95
CASP4P49662 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.89□□□□□ -1.95
CASP4P49662 DUXAP10-204ENST00000612052 616 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AL138880.2-201ENST00000616214 239 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.89□□□□□ -1.95
CASP4P49662 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CASP4P49662 AC005539.1-201ENST00000443768 1479 ntBASIC2.89□□□□□ -1.95
CASP4P49662 AC009812.4-201ENST00000569134 1805 ntBASIC2.89□□□□□ -1.95
CASP4P49662 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CASP4P49662 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.88□□□□□ -1.95
CASP4P49662 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CASP4P49662 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
CASP4P49662 HMGB1P17-201ENST00000403495 628 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AL139281.1-201ENST00000422120 335 ntBASIC2.88□□□□□ -1.95
CASP4P49662 MTCO2P5-201ENST00000422621 426 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.88□□□□□ -1.95
CASP4P49662 TMEM251P1-201ENST00000503717 318 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.88□□□□□ -1.95
CASP4P49662 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CASP4P49662 HMGB1P28-201ENST00000507778 552 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AL359273.1-201ENST00000510918 627 ntBASIC2.88□□□□□ -1.95
CASP4P49662 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.88□□□□□ -1.95
CASP4P49662 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.88□□□□□ -1.95
CASP4P49662 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CASP4P49662 DNAJC8P1-201ENST00000554535 372 ntBASIC2.88□□□□□ -1.95
CASP4P49662 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.88□□□□□ -1.95
CASP4P49662 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.88□□□□□ -1.95
CASP4P49662 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.88□□□□□ -1.95
CASP4P49662 AC011260.1-201ENST00000578420 472 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.88□□□□□ -1.95
CASP4P49662 AC004853.1-201ENST00000604902 698 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AL596245.1-201ENST00000618994 362 ntBASIC2.88□□□□□ -1.95
CASP4P49662 AC011330.2-201ENST00000621680 635 ntBASIC2.88□□□□□ -1.95
CASP4P49662 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CASP4P49662 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CASP4P49662 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CASP4P49662 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.87□□□□□ -1.95
CASP4P49662 AC011460.1-201ENST00000636268 1834 ntBASIC2.87□□□□□ -1.95
CASP4P49662 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CASP4P49662 FRG1BP-201ENST00000278882 761 ntBASIC2.87□□□□□ -1.95
CASP4P49662 MIR135A2-201ENST00000384854 100 ntBASIC2.87□□□□□ -1.95
CASP4P49662 MIR9-1-201ENST00000385198 89 ntBASIC2.87□□□□□ -1.95
CASP4P49662 SNORA40.2-201ENST00000390847 128 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.87□□□□□ -1.95
CASP4P49662 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.87□□□□□ -1.95
CASP4P49662 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.87□□□□□ -1.95
CASP4P49662 AC024082.2-201ENST00000434771 238 ntBASIC2.87□□□□□ -1.95
CASP4P49662 SDCBPP1-201ENST00000440192 890 ntBASIC2.87□□□□□ -1.95
CASP4P49662 RPL23AP58-201ENST00000440453 469 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AL592447.1-201ENST00000447592 540 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AL353691.1-201ENST00000451332 387 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AL359385.1-201ENST00000456509 365 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AL049873.1-201ENST00000480540 376 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.87□□□□□ -1.95
CASP4P49662 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.87□□□□□ -1.95
CASP4P49662 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.87□□□□□ -1.95
CASP4P49662 AC022483.1-201ENST00000514020 567 ntBASIC2.87□□□□□ -1.95
CASP4P49662 RNA5SP356-201ENST00000515972 94 ntBASIC2.87□□□□□ -1.95
CASP4P49662 RNU6-276P-201ENST00000516114 96 ntBASIC2.87□□□□□ -1.95
CASP4P49662 RN7SKP31-201ENST00000516354 278 ntBASIC2.87□□□□□ -1.95
CASP4P49662 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.87□□□□□ -1.95
CASP4P49662 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.87□□□□□ -1.95
CASP4P49662 AADACP1-206ENST00000561502 1193 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.87□□□□□ -1.95
CASP4P49662 HMGB1P6-201ENST00000569046 646 ntBASIC2.87□□□□□ -1.95
CASP4P49662 MIR4319-201ENST00000577285 85 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC090615.1-201ENST00000577519 154 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
CASP4P49662 AC004987.4-201ENST00000603383 338 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.87□□□□□ -1.95
CASP4P49662 AC104763.3-201ENST00000613765 618 ntBASIC2.87□□□□□ -1.95
CASP4P49662 AL049777.1-201ENST00000622740 518 ntBASIC2.87□□□□□ -1.95
CASP4P49662 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.87□□□□□ -1.95
CASP4P49662 AC008568.2-201ENST00000623862 2313 ntBASIC2.87□□□□□ -1.95
CASP4P49662 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CASP4P49662 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
CASP4P49662 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.86□□□□□ -1.95
CASP4P49662 RNU6-7-201ENST00000364784 107 ntBASIC2.86□□□□□ -1.95
CASP4P49662 RNU6-8-201ENST00000365467 107 ntBASIC2.86□□□□□ -1.95
CASP4P49662 CD24P4-201ENST00000382840 243 ntBASIC2.86□□□□□ -1.95
CASP4P49662 RNU6-1027P-201ENST00000383998 107 ntBASIC2.86□□□□□ -1.95
CASP4P49662 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CASP4P49662 RPL21P75-201ENST00000396599 483 ntBASIC2.86□□□□□ -1.95
CASP4P49662 RPL21P28-201ENST00000401418 483 ntBASIC2.86□□□□□ -1.95
CASP4P49662 AL592114.1-201ENST00000403842 483 ntBASIC2.86□□□□□ -1.95
CASP4P49662 MIR1289-1-201ENST00000408836 144 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms