Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC114967.1-201ENST00000504890 259 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX1P47902 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX1P47902 RNA5SP380-201ENST00000517190 98 ntBASIC3.06□□□□□ -1.92
CDX1P47902 RNU6-711P-201ENST00000517255 106 ntBASIC3.06□□□□□ -1.92
CDX1P47902 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX1P47902 MTCO1P47-201ENST00000523889 1271 ntBASIC3.06□□□□□ -1.92
CDX1P47902 DEFB108A-201ENST00000530110 222 ntBASIC3.06□□□□□ -1.92
CDX1P47902 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX1P47902 YPEL5P3-201ENST00000547227 352 ntBASIC3.06□□□□□ -1.92
CDX1P47902 TGIF1P1-201ENST00000558095 802 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AL356432.3-201ENST00000568952 465 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AC121334.2-201ENST00000605387 271 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AC092354.1-201ENST00000606057 376 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX1P47902 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.06□□□□□ -1.92
CDX1P47902 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX1P47902 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CDX1P47902 AC058791.1-201ENST00000608412 3198 ntBASIC3.06□□□□□ -1.92
CDX1P47902 AC118273.1-201ENST00000525324 3006 ntBASIC3.06□□□□□ -1.92
CDX1P47902 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX1P47902 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.05□□□□□ -1.92
CDX1P47902 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDX1P47902 RNU5A-8P-201ENST00000364102 114 ntBASIC3.05□□□□□ -1.92
CDX1P47902 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 MIR134-201ENST00000385258 73 ntBASIC3.05□□□□□ -1.92
CDX1P47902 RPL32P23-201ENST00000397237 405 ntBASIC3.05□□□□□ -1.92
CDX1P47902 RNA5SP38-201ENST00000410750 119 ntBASIC3.05□□□□□ -1.92
CDX1P47902 RNA5SP107-201ENST00000411358 122 ntBASIC3.05□□□□□ -1.92
CDX1P47902 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX1P47902 USP12PX-201ENST00000432383 1057 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX1P47902 AC007389.2-201ENST00000434630 306 ntBASIC3.05□□□□□ -1.92
CDX1P47902 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 SETD6P1-201ENST00000444575 317 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC125238.1-201ENST00000448842 249 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX1P47902 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX1P47902 SETP11-201ENST00000473027 690 ntBASIC3.05□□□□□ -1.92
CDX1P47902 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC010631.1-201ENST00000474150 156 ntBASIC3.05□□□□□ -1.92
CDX1P47902 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.05□□□□□ -1.92
CDX1P47902 AC110768.1-201ENST00000509222 400 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC006445.2-201ENST00000510061 472 ntBASIC3.05□□□□□ -1.92
CDX1P47902 OR5BM1P-201ENST00000512021 366 ntBASIC3.05□□□□□ -1.92
CDX1P47902 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 RNA5SP164-201ENST00000516533 110 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX1P47902 NDUFA5P2-201ENST00000519723 344 ntBASIC3.05□□□□□ -1.92
CDX1P47902 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX1P47902 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC123904.2-201ENST00000548059 300 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC004024.1-201ENST00000549244 247 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC008088.1-201ENST00000580993 280 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.05□□□□□ -1.92
CDX1P47902 AC006130.2-201ENST00000586202 326 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC002545.1-201ENST00000592511 181 ntBASIC3.05□□□□□ -1.92
CDX1P47902 KC877982.1-201ENST00000602313 470 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AF131215.7-201ENST00000602443 707 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC013553.2-201ENST00000604244 589 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AL022161.1-201ENST00000604390 213 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC012360.2-201ENST00000609349 391 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC245517.5-201ENST00000611529 162 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC004696.1-201ENST00000614345 607 ntBASIC3.05□□□□□ -1.92
CDX1P47902 AC009159.1-201ENST00000618386 642 ntBASIC3.05□□□□□ -1.92
CDX1P47902 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.05□□□□□ -1.92
CDX1P47902 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CDX1P47902 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDX1P47902 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 AL161912.2-201ENST00000565707 3007 ntBASIC3.05□□□□□ -1.92
CDX1P47902 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDX1P47902 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDX1P47902 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDX1P47902 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDX1P47902 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDX1P47902 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDX1P47902 RNU1-75P-201ENST00000347264 129 ntBASIC3.04□□□□□ -1.92
CDX1P47902 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CDX1P47902 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.04□□□□□ -1.92
CDX1P47902 MIR554-201ENST00000384874 96 ntBASIC3.04□□□□□ -1.92
CDX1P47902 RPL7P25-201ENST00000404151 721 ntBASIC3.04□□□□□ -1.92
CDX1P47902 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.04□□□□□ -1.92
CDX1P47902 RNU6-55P-201ENST00000411092 107 ntBASIC3.04□□□□□ -1.92
CDX1P47902 RNU6-954P-201ENST00000411355 107 ntBASIC3.04□□□□□ -1.92
CDX1P47902 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.04□□□□□ -1.92
CDX1P47902 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX1P47902 USP9YP36-201ENST00000424581 829 ntBASIC3.04□□□□□ -1.92
CDX1P47902 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.04□□□□□ -1.92
CDX1P47902 TIMM9P1-201ENST00000436122 256 ntBASIC3.04□□□□□ -1.92
CDX1P47902 TAAR7P-201ENST00000436141 242 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms