Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-76P-201ENST00000384060 104 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 MIR1284-201ENST00000408337 120 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 RNU6-920P-201ENST00000410926 92 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC092573.2-201ENST00000434546 243 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 HSPD1P21-201ENST00000436541 245 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 OR6C5P-201ENST00000452388 923 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 RPL31P3-201ENST00000458430 332 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 SETP11-201ENST00000473027 690 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC080014.1-201ENST00000496877 1201 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 OR2A20P-203ENST00000498397 1268 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC091435.1-201ENST00000505442 584 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.39□□□□□ -1.87
HNF4AP41235 SNORA70.19-201ENST00000516717 90 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 PAICSP4-201ENST00000517543 1253 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC239860.2-201ENST00000525886 270 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 OR7K1P-201ENST00000546439 926 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 AL845331.3-202ENST00000562856 261 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC012435.1-202ENST00000568772 240 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.39□□□□□ -1.87
HNF4AP41235 MIR1254-2-201ENST00000579553 63 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 ZNF415P1-201ENST00000582279 1166 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AP001429.1-201ENST00000602568 530 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC079089.3-201ENST00000603094 673 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC135507.1-201ENST00000607214 561 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC002550.2-201ENST00000621246 394 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AC110801.1-201ENST00000623590 212 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
HNF4AP41235 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HNF4AP41235 AC011477.1-204ENST00000623416 1325 ntBASIC3.39□□□□□ -1.87
HNF4AP41235 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HNF4AP41235 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HNF4AP41235 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HNF4AP41235 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC091564.4-201ENST00000533934 2194 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HNF4AP41235 Y_RNA.436-201ENST00000384097 102 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 MIR200C-201ENST00000384980 68 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 RPL23AP29-201ENST00000397284 453 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.38□□□□□ -1.87
HNF4AP41235 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
HNF4AP41235 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC091286.1-201ENST00000431233 461 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AC073063.1-201ENST00000434352 607 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AC090774.1-201ENST00000435925 246 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AL117351.1-201ENST00000438864 766 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.38□□□□□ -1.87
HNF4AP41235 MTND1P29-201ENST00000448112 647 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC093392.2-201ENST00000450682 337 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC007967.1-201ENST00000455422 1159 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 MTND4LP3-201ENST00000468320 276 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AC034236.1-201ENST00000469891 373 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC104685.1-201ENST00000502445 371 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.38□□□□□ -1.87
HNF4AP41235 TXNP6-201ENST00000510190 310 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 MTND5P13-201ENST00000513046 1079 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 GMPSP1-201ENST00000514075 579 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 RNU6-678P-201ENST00000516832 109 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 RNU6-798P-201ENST00000516912 103 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 CASP1P1-201ENST00000526345 212 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.38□□□□□ -1.87
HNF4AP41235 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 AP001981.2-201ENST00000603241 418 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 AL590229.1-201ENST00000603497 542 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 NUTF2P8-201ENST00000604593 363 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 AL031667.3-201ENST00000620124 655 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 Z69908.1-201ENST00000622603 247 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 PCMTD1P7-201ENST00000634506 357 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 MIR4275-201ENST00000636486 87 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
HNF4AP41235 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
HNF4AP41235 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
HNF4AP41235 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.38□□□□□ -1.87
HNF4AP41235 MTND5P24-201ENST00000438892 1767 ntBASIC3.38□□□□□ -1.87
HNF4AP41235 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.37□□□□□ -1.87
HNF4AP41235 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.37□□□□□ -1.87
HNF4AP41235 AC058791.1-201ENST00000608412 3198 ntBASIC3.37□□□□□ -1.87
HNF4AP41235 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms