Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.72□□□□□ -1.49
RFX1P22670 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 AC009220.1-201ENST00000451614 275 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AC009901.1-201ENST00000506703 541 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AC096745.1-201ENST00000509945 370 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX1P22670 RPL23AP87-202ENST00000573039 466 ntBASIC5.72□□□□□ -1.49
RFX1P22670 RN7SL652P-201ENST00000577769 300 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.72□□□□□ -1.49
RFX1P22670 HMGN2P28-201ENST00000606102 262 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AC009229.3-201ENST00000608056 282 ntBASIC5.72□□□□□ -1.49
RFX1P22670 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 AP000346.3-201ENST00000622821 210 ntBASIC5.72□□□□□ -1.49
RFX1P22670 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
RFX1P22670 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.72□□□□□ -1.49
RFX1P22670 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
RFX1P22670 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RFX1P22670 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.72□□□□□ -1.49
RFX1P22670 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.72□□□□□ -1.49
RFX1P22670 SAMMSON-226ENST00000642089 1582 ntBASIC5.72□□□□□ -1.49
RFX1P22670 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.71□□□□□ -1.49
RFX1P22670 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RFX1P22670 MTND5P30-201ENST00000452896 1731 ntBASIC5.71□□□□□ -1.49
RFX1P22670 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFX1P22670 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFX1P22670 DEFB108F-201ENST00000344638 222 ntBASIC5.71□□□□□ -1.5
RFX1P22670 SNORD62.1-201ENST00000362541 86 ntBASIC5.71□□□□□ -1.5
RFX1P22670 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFX1P22670 RNU6-1032P-201ENST00000384100 107 ntBASIC5.71□□□□□ -1.5
RFX1P22670 MIR141-201ENST00000384975 95 ntBASIC5.71□□□□□ -1.5
RFX1P22670 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFX1P22670 RNU6-1106P-201ENST00000390845 107 ntBASIC5.71□□□□□ -1.5
RFX1P22670 UBE2V1P4-201ENST00000425374 344 ntBASIC5.71□□□□□ -1.5
RFX1P22670 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.71□□□□□ -1.5
RFX1P22670 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX1P22670 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.71□□□□□ -1.5
RFX1P22670 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.71□□□□□ -1.5
RFX1P22670 AL389915.2-201ENST00000454576 441 ntBASIC5.71□□□□□ -1.5
RFX1P22670 Z92846.1-201ENST00000456203 268 ntBASIC5.71□□□□□ -1.5
RFX1P22670 SNORD5.1-201ENST00000458800 75 ntBASIC5.71□□□□□ -1.5
RFX1P22670 snoU13.20-201ENST00000459180 104 ntBASIC5.71□□□□□ -1.5
RFX1P22670 SNRPCP2-201ENST00000504370 475 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFX1P22670 APOOP4-201ENST00000513530 597 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC006427.1-201ENST00000514359 712 ntBASIC5.71□□□□□ -1.5
RFX1P22670 Y_RNA.670-201ENST00000516255 105 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC069113.1-201ENST00000517763 267 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC087369.1-201ENST00000520775 996 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC021006.3-201ENST00000530771 192 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.71□□□□□ -1.5
RFX1P22670 MIR4330-201ENST00000579077 105 ntBASIC5.71□□□□□ -1.5
RFX1P22670 MIR4697-201ENST00000582977 78 ntBASIC5.71□□□□□ -1.5
RFX1P22670 AC092608.2-201ENST00000624427 218 ntBASIC5.71□□□□□ -1.5
RFX1P22670 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RFX1P22670 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
RFX1P22670 AC099654.2-201ENST00000433031 1980 ntBASIC5.71□□□□□ -1.5
RFX1P22670 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX1P22670 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX1P22670 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFX1P22670 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RFX1P22670 RNU6-1309P-201ENST00000363305 108 ntBASIC5.7□□□□□ -1.5
RFX1P22670 Y_RNA.252-201ENST00000364556 101 ntBASIC5.7□□□□□ -1.5
RFX1P22670 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFX1P22670 Y_RNA.463-201ENST00000384271 102 ntBASIC5.7□□□□□ -1.5
RFX1P22670 SNORA75.6-201ENST00000391318 127 ntBASIC5.7□□□□□ -1.5
RFX1P22670 RPL21P90-201ENST00000415692 466 ntBASIC5.7□□□□□ -1.5
RFX1P22670 MCFD2P1-201ENST00000417812 300 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.7□□□□□ -1.5
RFX1P22670 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.7□□□□□ -1.5
RFX1P22670 CYCSP34-201ENST00000458172 304 ntBASIC5.7□□□□□ -1.5
RFX1P22670 RNU7-138P-201ENST00000459479 64 ntBASIC5.7□□□□□ -1.5
RFX1P22670 RPS3AP41-201ENST00000462701 778 ntBASIC5.7□□□□□ -1.5
RFX1P22670 RPS15AP34-201ENST00000487776 387 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX1P22670 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX1P22670 ENPP7P11-201ENST00000505915 627 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.7□□□□□ -1.5
RFX1P22670 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.7□□□□□ -1.5
RFX1P22670 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.7□□□□□ -1.5
RFX1P22670 AC023442.1-201ENST00000531247 422 ntBASIC5.7□□□□□ -1.5
RFX1P22670 SNRPGP16-201ENST00000533275 226 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC092490.3-201ENST00000545370 572 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC006349.1-201ENST00000555526 235 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC022884.2-201ENST00000578535 580 ntBASIC5.7□□□□□ -1.5
RFX1P22670 MIR4680-201ENST00000580906 66 ntBASIC5.7□□□□□ -1.5
RFX1P22670 RN7SL52P-201ENST00000584271 284 ntBASIC5.7□□□□□ -1.5
RFX1P22670 AC008814.1-201ENST00000603797 406 ntBASIC5.7□□□□□ -1.5
RFX1P22670 EIF3FP1-201ENST00000613970 806 ntBASIC5.7□□□□□ -1.5
RFX1P22670 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms