Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL096701.2-201ENST00000416920 238 ntBASIC1.19□□□□□ -2.22
ACANP16112 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.19□□□□□ -2.22
ACANP16112 AC005517.2-201ENST00000424673 553 ntBASIC1.19□□□□□ -2.22
ACANP16112 AC234781.2-201ENST00000426370 994 ntBASIC1.19□□□□□ -2.22
ACANP16112 SETP8-201ENST00000435341 628 ntBASIC1.19□□□□□ -2.22
ACANP16112 MTCO1P48-201ENST00000448024 1096 ntBASIC1.19□□□□□ -2.22
ACANP16112 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.19□□□□□ -2.22
ACANP16112 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
ACANP16112 AC021382.1-201ENST00000483523 359 ntBASIC1.19□□□□□ -2.22
ACANP16112 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC1.19□□□□□ -2.22
ACANP16112 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ACANP16112 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC1.19□□□□□ -2.22
ACANP16112 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
ACANP16112 DYNLT3P1-201ENST00000378574 347 ntBASIC1.18□□□□□ -2.22
ACANP16112 Y_RNA.433-201ENST00000384089 102 ntBASIC1.18□□□□□ -2.22
ACANP16112 USP9YP33-201ENST00000412220 421 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.18□□□□□ -2.22
ACANP16112 USP9YP35-201ENST00000435696 412 ntBASIC1.18□□□□□ -2.22
ACANP16112 RPL7P5-201ENST00000471472 736 ntBASIC1.18□□□□□ -2.22
ACANP16112 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
ACANP16112 OR8X1P-201ENST00000534542 869 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC1.18□□□□□ -2.22
ACANP16112 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ACANP16112 ABI1P1-201ENST00000603375 1120 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.18□□□□□ -2.22
ACANP16112 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
ACANP16112 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
ACANP16112 OR5AQ1P-202ENST00000641257 1534 ntBASIC1.18□□□□□ -2.22
ACANP16112 SNORA16.1-201ENST00000364597 132 ntBASIC1.18□□□□□ -2.22
ACANP16112 Y_RNA.274-201ENST00000364714 101 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC092638.1-201ENST00000411966 1275 ntBASIC1.18□□□□□ -2.22
ACANP16112 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.18□□□□□ -2.22
ACANP16112 AL357520.1-201ENST00000441557 453 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC024614.2-201ENST00000577584 372 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC012493.3-201ENST00000604494 112 ntBASIC1.18□□□□□ -2.22
ACANP16112 MIR6788-201ENST00000618842 66 ntBASIC1.18□□□□□ -2.22
ACANP16112 AP002967.1-201ENST00000624203 539 ntBASIC1.18□□□□□ -2.22
ACANP16112 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.18□□□□□ -2.22
ACANP16112 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.18□□□□□ -2.22
ACANP16112 MTND4P1-201ENST00000457501 1466 ntBASIC1.18□□□□□ -2.22
ACANP16112 AC091152.2-201ENST00000591628 2569 ntBASIC1.18□□□□□ -2.22
ACANP16112 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
ACANP16112 AL355596.1-201ENST00000565399 3996 ntBASIC1.17□□□□□ -2.22
ACANP16112 NUP58P1-201ENST00000502546 1738 ntBASIC1.17□□□□□ -2.22
ACANP16112 RNA5SP257-201ENST00000363023 116 ntBASIC1.17□□□□□ -2.22
ACANP16112 RNA5SP139-201ENST00000364340 117 ntBASIC1.17□□□□□ -2.22
ACANP16112 EBAG9P1-201ENST00000418955 543 ntBASIC1.17□□□□□ -2.22
ACANP16112 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ACANP16112 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.17□□□□□ -2.22
ACANP16112 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.17□□□□□ -2.22
ACANP16112 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ACANP16112 NPM1P52-201ENST00000518264 846 ntBASIC1.17□□□□□ -2.22
ACANP16112 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.17□□□□□ -2.22
ACANP16112 AC097468.3-201ENST00000607956 456 ntBASIC1.17□□□□□ -2.22
ACANP16112 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ACANP16112 AC110774.1-201ENST00000623567 2018 ntBASIC1.17□□□□□ -2.22
ACANP16112 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.17□□□□□ -2.22
ACANP16112 SNORA62.2-201ENST00000364672 152 ntBASIC1.17□□□□□ -2.22
ACANP16112 MIR216A-201ENST00000385063 110 ntBASIC1.17□□□□□ -2.22
ACANP16112 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.17□□□□□ -2.22
ACANP16112 RPS3AP44-201ENST00000425466 790 ntBASIC1.17□□□□□ -2.22
ACANP16112 SNRPFP3-201ENST00000457792 225 ntBASIC1.17□□□□□ -2.22
ACANP16112 AC078918.1-201ENST00000498515 228 ntBASIC1.17□□□□□ -2.22
ACANP16112 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.17□□□□□ -2.22
ACANP16112 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.17□□□□□ -2.22
ACANP16112 AC000367.1-201ENST00000452711 1766 ntBASIC1.17□□□□□ -2.22
ACANP16112 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
ACANP16112 RNA5SP62-201ENST00000363457 110 ntBASIC1.16□□□□□ -2.22
ACANP16112 RNU1-133P-201ENST00000364867 167 ntBASIC1.16□□□□□ -2.22
ACANP16112 Y_RNA.471-201ENST00000384312 102 ntBASIC1.16□□□□□ -2.22
ACANP16112 RNU1-139P-201ENST00000391307 165 ntBASIC1.16□□□□□ -2.22
ACANP16112 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.16□□□□□ -2.22
ACANP16112 AC007560.1-201ENST00000426912 237 ntBASIC1.16□□□□□ -2.22
ACANP16112 DUXAP8-207ENST00000456786 622 ntBASIC1.16□□□□□ -2.22
ACANP16112 RPS29P20-201ENST00000489592 171 ntBASIC1.16□□□□□ -2.22
ACANP16112 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.16□□□□□ -2.22
ACANP16112 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC1.16□□□□□ -2.22
ACANP16112 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.16□□□□□ -2.22
ACANP16112 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.16□□□□□ -2.22
ACANP16112 MIR4448-201ENST00000584360 86 ntBASIC1.16□□□□□ -2.22
ACANP16112 AC007229.1-201ENST00000590455 412 ntBASIC1.16□□□□□ -2.22
ACANP16112 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.16□□□□□ -2.22
ACANP16112 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.16□□□□□ -2.22
ACANP16112 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.16□□□□□ -2.22
ACANP16112 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
ACANP16112 AC022513.1-201ENST00000624512 117 ntBASIC1.16□□□□□ -2.22
ACANP16112 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.16□□□□□ -2.22
ACANP16112 ZNF271P-202ENST00000465539 1970 ntBASIC1.16□□□□□ -2.22
ACANP16112 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ACANP16112 AC009541.1-201ENST00000438279 2662 ntBASIC1.16□□□□□ -2.22
ACANP16112 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
ACANP16112 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
ACANP16112 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.16□□□□□ -2.22
ACANP16112 THAP5P1-201ENST00000439089 262 ntBASIC1.16□□□□□ -2.22
ACANP16112 HMGN1P8-201ENST00000463578 288 ntBASIC1.16□□□□□ -2.22
ACANP16112 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.16□□□□□ -2.22
ACANP16112 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.16□□□□□ -2.22
ACANP16112 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.16□□□□□ -2.22
ACANP16112 AC012531.5-201ENST00000611375 151 ntBASIC1.16□□□□□ -2.22
ACANP16112 AC011890.2-201ENST00000613393 294 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms