Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOAP06340 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOAP06340 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 RNU4-1-201ENST00000363925 141 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RNU6-730P-201ENST00000383954 104 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RNA5SP424-201ENST00000390988 115 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RPL23AP32-201ENST00000395315 459 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RPL7P60-201ENST00000397636 735 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 SSXP10-201ENST00000402595 565 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC008850.1-201ENST00000427546 362 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC087650.1-201ENST00000431445 468 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DOAP06340 RPL23AP20-201ENST00000447965 421 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC006480.1-201ENST00000449887 378 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RPS3AP50-201ENST00000487064 803 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC093677.1-201ENST00000514414 678 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC016065.2-201ENST00000514530 444 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RNA5SP208-201ENST00000516156 78 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 Vault.3-201ENST00000516676 95 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RNU6-201P-201ENST00000517100 61 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC024224.1-201ENST00000538284 609 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AL512310.1-201ENST00000548639 172 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC009101.1-201ENST00000568135 242 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 RPS3AP23-202ENST00000574601 686 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AL355472.4-201ENST00000610233 626 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 BX664608.1-201ENST00000610519 487 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC079684.1-201ENST00000621405 437 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC093648.1-201ENST00000623546 606 ntBASIC4.42□□□□□ -1.7
HLA-DOAP06340 FER-210ENST00000628534 558 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DOAP06340 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 ZNF962P-201ENST00000443465 3140 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 MAPK10-373ENST00000641983 6772 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC007685.1-201ENST00000329806 452 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 RNU6-451P-201ENST00000362921 107 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 SNORA70.4-201ENST00000365509 134 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 MIR513A2-201ENST00000385249 127 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 OR9R1P-201ENST00000412200 877 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 RPL31P45-201ENST00000419532 356 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 RWDD4P2-201ENST00000426392 563 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 PSMA6P3-201ENST00000428242 164 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AL590233.1-201ENST00000430017 456 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC011742.1-201ENST00000431448 434 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 HMGB3P12-201ENST00000438745 556 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC093019.1-201ENST00000443135 252 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC023194.1-201ENST00000493084 308 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC010587.1-201ENST00000505809 469 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC005261.5-201ENST00000596280 355 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AL162413.1-201ENST00000603198 110 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC025588.3-201ENST00000604182 274 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 BNIP3P10-201ENST00000605360 577 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AC015908.5-201ENST00000623289 343 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 AP006248.2-201ENST00000623309 592 ntBASIC4.41□□□□□ -1.7
HLA-DOAP06340 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.41□□□□□ -1.7
HLA-DOAP06340 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HLA-DOAP06340 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HLA-DOAP06340 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.4□□□□□ -1.7
HLA-DOAP06340 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
HLA-DOAP06340 MIR208A-201ENST00000362287 71 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 RNU6-28P-201ENST00000362378 107 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 RNY3P3-201ENST00000363816 102 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 XGY1-201ENST00000381172 446 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 RNU6-456P-201ENST00000384493 107 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 SOD2P1-201ENST00000396543 562 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 BTBD10P2-201ENST00000404779 676 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 AC092832.1-201ENST00000422934 400 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 AL353777.1-201ENST00000425552 326 ntBASIC4.4□□□□□ -1.71
HLA-DOAP06340 RPL23AP30-201ENST00000432419 501 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms