Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PPP1R11P2-201ENST00000423543 382 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.24□□□□□ -2.05
UPK1BO75841 WARS2P1-201ENST00000429678 537 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 USP9YP22-201ENST00000438971 294 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC011816.1-201ENST00000441346 546 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AL358232.1-201ENST00000448030 501 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 MTND2P24-201ENST00000453434 806 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 MTCYBP16-201ENST00000509187 1129 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC026801.2-201ENST00000515352 425 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 RNU6-1225P-201ENST00000516336 65 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 SLC2A13P1-201ENST00000531560 322 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC007458.1-201ENST00000542812 373 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
UPK1BO75841 HIGD1AP17-201ENST00000554576 276 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 AC090615.1-201ENST00000577519 154 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 MIR3912-201ENST00000577566 105 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 AC090616.3-201ENST00000582184 217 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.24□□□□□ -2.05
UPK1BO75841 VN1R78P-201ENST00000597393 564 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AL390838.2-201ENST00000602394 274 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC019159.1-201ENST00000605094 187 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC069304.2-201ENST00000605154 435 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 RPL21P136-201ENST00000605378 396 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 BNIP3P19-201ENST00000605397 577 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AP002802.2-201ENST00000605877 235 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AL158211.4-201ENST00000606988 584 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC009237.15-201ENST00000610252 501 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
UPK1BO75841 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.24□□□□□ -2.05
UPK1BO75841 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
UPK1BO75841 AC010680.1-201ENST00000590024 3590 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 AC005832.2-201ENST00000538921 1430 ntBASIC2.24□□□□□ -2.05
UPK1BO75841 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.24□□□□□ -2.05
UPK1BO75841 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
UPK1BO75841 RNA5SP50-201ENST00000363731 107 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 RNU1-33P-201ENST00000364249 162 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
UPK1BO75841 MTCO1P56-201ENST00000401674 224 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 RPS4XP7-201ENST00000406274 780 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1BO75841 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.23□□□□□ -2.05
UPK1BO75841 AC069282.1-201ENST00000411911 526 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 Z85995.1-201ENST00000415547 335 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 RPF2P1-201ENST00000424137 906 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AL356867.1-201ENST00000429623 299 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1BO75841 MTCYBP3-201ENST00000445588 1137 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UPK1BO75841 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 OR5BM1P-201ENST00000512021 366 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC092593.2-201ENST00000513866 913 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC112198.4-201ENST00000515450 351 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 RNU6-1028P-201ENST00000517164 93 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1BO75841 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UPK1BO75841 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 OR4R1P-201ENST00000529879 463 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC092451.2-201ENST00000538746 658 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC124947.2-202ENST00000552735 133 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.23□□□□□ -2.05
UPK1BO75841 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.23□□□□□ -2.05
UPK1BO75841 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.23□□□□□ -2.05
UPK1BO75841 AC104072.1-201ENST00000568817 668 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AC136624.4-201ENST00000573044 370 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.23□□□□□ -2.05
UPK1BO75841 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
UPK1BO75841 AL022067.1-201ENST00000602426 454 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 AL136363.1-201ENST00000605349 337 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
UPK1BO75841 PABPC1P9-201ENST00000426076 1612 ntBASIC2.23□□□□□ -2.05
UPK1BO75841 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
UPK1BO75841 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UPK1BO75841 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UPK1BO75841 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UPK1BO75841 SNORA71.1-201ENST00000364523 117 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 snoZ40.1-201ENST00000364540 72 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNU6-343P-201ENST00000364709 104 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNU6-224P-201ENST00000384055 107 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MIR627-201ENST00000384979 97 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MIR767-201ENST00000390228 109 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 RNU6-193P-201ENST00000410977 107 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC096533.1-201ENST00000411645 353 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AC068533.2-201ENST00000411872 306 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.22□□□□□ -2.05
UPK1BO75841 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.22□□□□□ -2.05
UPK1BO75841 MTND4P3-201ENST00000417829 541 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MRPS36P1-201ENST00000421291 307 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MTCO2P5-201ENST00000422621 426 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 MTCO2P17-201ENST00000424336 677 ntBASIC2.22□□□□□ -2.05
UPK1BO75841 AL590383.1-201ENST00000428602 75 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms