Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF40AO75400 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40AO75400 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 RN7SKP95-201ENST00000362860 303 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 SNORD113-7-201ENST00000363762 77 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 RNU6-190P-201ENST00000384154 102 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 MIR585-201ENST00000384887 94 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 RNU6-882P-201ENST00000391025 103 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 RPL21P112-201ENST00000434403 463 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 NEFMP1-201ENST00000443423 1006 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC116533.1-201ENST00000459748 321 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 RPS3AP41-201ENST00000462701 778 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 RNU6-123P-201ENST00000516163 102 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 RNU6-685P-201ENST00000517088 95 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AP001804.3-201ENST00000525146 880 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC133555.2-201ENST00000550213 292 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AL121603.1-201ENST00000553815 142 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.37□□□□□ -1.55
PRPF40AO75400 AL133215.3-201ENST00000609801 448 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC100827.5-201ENST00000615883 426 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 AC022893.2-201ENST00000564832 3296 ntBASIC5.37□□□□□ -1.55
PRPF40AO75400 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF40AO75400 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PRPF40AO75400 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.37□□□□□ -1.55
PRPF40AO75400 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.37□□□□□ -1.55
PRPF40AO75400 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PRPF40AO75400 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AC121333.1-201ENST00000567488 2709 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PRPF40AO75400 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.394-201ENST00000383942 103 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 U3.30-201ENST00000391308 210 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 RNA5SP111-201ENST00000411386 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 POLHP1-201ENST00000411806 470 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AC006466.1-201ENST00000438721 289 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 SCARNA18-201ENST00000459004 134 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 RNU7-66P-201ENST00000459469 62 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AC083982.1-201ENST00000485679 344 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AC091868.1-201ENST00000508746 304 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 EDDM3DP-201ENST00000554692 434 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.812-201ENST00000610788 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 PART1_1.1-201ENST00000611761 217 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.784-201ENST00000613803 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 SDR42E1P2-201ENST00000614861 481 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.787-201ENST00000616522 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.780-201ENST00000617336 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 Y_RNA.801-201ENST00000619005 101 ntBASIC5.36□□□□□ -1.55
PRPF40AO75400 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40AO75400 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF40AO75400 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40AO75400 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40AO75400 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40AO75400 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AC139769.1-204ENST00000472297 1931 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
PRPF40AO75400 Y_RNA.301-201ENST00000364990 103 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 Y_RNA.315-201ENST00000365117 102 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 COX6B1P1-201ENST00000415962 213 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 RPS12P23-201ENST00000419579 400 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 MTCO2P27-201ENST00000420740 428 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AC079168.2-201ENST00000453977 416 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC091685.2-201ENST00000454924 864 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 Y_RNA.635-201ENST00000459041 101 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 SNORD19B-201ENST00000459623 84 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AC090151.1-201ENST00000520784 730 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AC008033.2-201ENST00000542626 177 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF40AO75400 AL121576.1-201ENST00000556055 276 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40AO75400 RPL23AP84-201ENST00000571193 464 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 MTND6P33-201ENST00000571794 183 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 MIR4480-201ENST00000582492 71 ntBASIC5.35□□□□□ -1.55
PRPF40AO75400 AC091178.1-203ENST00000584586 279 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms