Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC011460.1-201ENST00000636268 1834 ntBASIC3.03□□□□□ -1.92
SDC3O75056 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SDC3O75056 RNU6-83P-201ENST00000384568 112 ntBASIC3.03□□□□□ -1.92
SDC3O75056 RNU6-952P-201ENST00000391164 108 ntBASIC3.03□□□□□ -1.92
SDC3O75056 UBE2V1P2-201ENST00000397758 440 ntBASIC3.03□□□□□ -1.92
SDC3O75056 RNU2-43P-201ENST00000410306 190 ntBASIC3.03□□□□□ -1.92
SDC3O75056 RNA5SP38-201ENST00000410750 119 ntBASIC3.03□□□□□ -1.92
SDC3O75056 EEF1A1P41-201ENST00000414667 207 ntBASIC3.03□□□□□ -1.92
SDC3O75056 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 OR2B8P-201ENST00000432841 938 ntBASIC3.03□□□□□ -1.92
SDC3O75056 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 Z80107.1-201ENST00000436830 412 ntBASIC3.03□□□□□ -1.92
SDC3O75056 Z73417.1-201ENST00000447373 778 ntBASIC3.03□□□□□ -1.92
SDC3O75056 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.03□□□□□ -1.92
SDC3O75056 ELOCP23-201ENST00000452014 332 ntBASIC3.03□□□□□ -1.92
SDC3O75056 HMGN1P18-201ENST00000457642 277 ntBASIC3.03□□□□□ -1.92
SDC3O75056 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.03□□□□□ -1.92
SDC3O75056 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.03□□□□□ -1.92
SDC3O75056 RPS29P26-201ENST00000477483 171 ntBASIC3.03□□□□□ -1.92
SDC3O75056 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.03□□□□□ -1.92
SDC3O75056 AC110760.3-202ENST00000515177 371 ntBASIC3.03□□□□□ -1.92
SDC3O75056 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 AC087465.1-201ENST00000560574 245 ntBASIC3.03□□□□□ -1.92
SDC3O75056 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.03□□□□□ -1.92
SDC3O75056 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.03□□□□□ -1.92
SDC3O75056 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.03□□□□□ -1.92
SDC3O75056 AC004853.1-201ENST00000604902 698 ntBASIC3.03□□□□□ -1.92
SDC3O75056 AC112220.3-201ENST00000605502 502 ntBASIC3.03□□□□□ -1.92
SDC3O75056 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.03□□□□□ -1.92
SDC3O75056 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.03□□□□□ -1.92
SDC3O75056 AL022578.1-201ENST00000439330 1433 ntBASIC3.02□□□□□ -1.93
SDC3O75056 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SDC3O75056 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
SDC3O75056 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 MIR22-201ENST00000362190 85 ntBASIC3.02□□□□□ -1.93
SDC3O75056 RNU4-28P-201ENST00000364739 141 ntBASIC3.02□□□□□ -1.93
SDC3O75056 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SDC3O75056 RN7SKP220-201ENST00000410611 288 ntBASIC3.02□□□□□ -1.93
SDC3O75056 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.02□□□□□ -1.93
SDC3O75056 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 THAP5P1-201ENST00000439089 262 ntBASIC3.02□□□□□ -1.93
SDC3O75056 HMGB3P11-201ENST00000440127 604 ntBASIC3.02□□□□□ -1.93
SDC3O75056 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 MTND3P1-201ENST00000441336 220 ntBASIC3.02□□□□□ -1.93
SDC3O75056 FGF7P5-201ENST00000441829 291 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.02□□□□□ -1.93
SDC3O75056 AL592447.1-201ENST00000447592 540 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AL590664.1-201ENST00000448065 339 ntBASIC3.02□□□□□ -1.93
SDC3O75056 Z99127.3-201ENST00000448158 395 ntBASIC3.02□□□□□ -1.93
SDC3O75056 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.02□□□□□ -1.93
SDC3O75056 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 AC068724.1-201ENST00000487100 792 ntBASIC3.02□□□□□ -1.93
SDC3O75056 RN7SL283P-201ENST00000489055 303 ntBASIC3.02□□□□□ -1.93
SDC3O75056 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.02□□□□□ -1.93
SDC3O75056 AC093677.1-201ENST00000514414 678 ntBASIC3.02□□□□□ -1.93
SDC3O75056 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.02□□□□□ -1.93
SDC3O75056 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 AC027807.1-201ENST00000559921 996 ntBASIC3.02□□□□□ -1.93
SDC3O75056 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.02□□□□□ -1.93
SDC3O75056 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.02□□□□□ -1.93
SDC3O75056 AC005951.1-201ENST00000576706 485 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AC090615.1-201ENST00000577519 154 ntBASIC3.02□□□□□ -1.93
SDC3O75056 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 MIR4760-201ENST00000585040 80 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.02□□□□□ -1.93
SDC3O75056 VN1R82P-201ENST00000601481 356 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AC006023.1-201ENST00000603944 259 ntBASIC3.02□□□□□ -1.93
SDC3O75056 AP002782.1-201ENST00000623107 614 ntBASIC3.02□□□□□ -1.93
SDC3O75056 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
SDC3O75056 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.02□□□□□ -1.93
SDC3O75056 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SDC3O75056 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SDC3O75056 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.01□□□□□ -1.93
SDC3O75056 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC011477.1-204ENST00000623416 1325 ntBASIC3.01□□□□□ -1.93
SDC3O75056 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SDC3O75056 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SDC3O75056 RNU6-28P-201ENST00000362378 107 ntBASIC3.01□□□□□ -1.93
SDC3O75056 RNU6-343P-201ENST00000364709 104 ntBASIC3.01□□□□□ -1.93
SDC3O75056 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.01□□□□□ -1.93
SDC3O75056 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
SDC3O75056 SNORA1.3-201ENST00000384676 136 ntBASIC3.01□□□□□ -1.93
SDC3O75056 USP9YP33-201ENST00000412220 421 ntBASIC3.01□□□□□ -1.93
SDC3O75056 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.01□□□□□ -1.93
SDC3O75056 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.01□□□□□ -1.93
SDC3O75056 RPL22P18-201ENST00000417197 377 ntBASIC3.01□□□□□ -1.93
SDC3O75056 RPL27AP8-201ENST00000424277 446 ntBASIC3.01□□□□□ -1.93
SDC3O75056 MTCYBP45-201ENST00000435243 565 ntBASIC3.01□□□□□ -1.93
SDC3O75056 USP9YP35-201ENST00000435696 412 ntBASIC3.01□□□□□ -1.93
SDC3O75056 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms