Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR183-201ENST00000384958 110 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RNU6-278P-201ENST00000390945 109 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 SNORD37.1-201ENST00000390968 65 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RNA5SP36-201ENST00000410197 133 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIN3BO60391 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.32□□□□□ -1.56
GRIN3BO60391 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AL161631.1-201ENST00000417933 486 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIN3BO60391 OR2AS1P-201ENST00000427827 319 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 MTATP6P16-201ENST00000434543 526 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 HMGB1P18-201ENST00000438801 619 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 EIF4A1P11-201ENST00000451239 222 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIN3BO60391 RNU4-49P-201ENST00000516080 140 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RNU1-95P-201ENST00000516357 160 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RNU7-51P-201ENST00000516560 62 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RNU1-128P-201ENST00000516704 160 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 RN7SKP256-201ENST00000517201 314 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 SUMO2P20-201ENST00000520803 283 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC5.32□□□□□ -1.56
GRIN3BO60391 AP005435.4-201ENST00000529514 284 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIN3BO60391 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIN3BO60391 SCOCP1-201ENST00000554676 349 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIN3BO60391 MIR4716-201ENST00000579628 84 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.32□□□□□ -1.56
GRIN3BO60391 BPIFA4P-203ENST00000603168 689 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AL022345.1-201ENST00000607292 135 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.32□□□□□ -1.56
GRIN3BO60391 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIN3BO60391 AL121839.2-201ENST00000565058 6943 ntBASIC5.32□□□□□ -1.56
GRIN3BO60391 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
GRIN3BO60391 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.32□□□□□ -1.56
GRIN3BO60391 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.32□□□□□ -1.56
GRIN3BO60391 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.32□□□□□ -1.56
GRIN3BO60391 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GRIN3BO60391 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GRIN3BO60391 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
GRIN3BO60391 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GRIN3BO60391 THAP12P5-201ENST00000405864 2275 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
GRIN3BO60391 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 Y_RNA.184-201ENST00000363884 108 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RNVU1-3-201ENST00000364313 161 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RNU4-20P-201ENST00000365601 151 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RNU6-146P-201ENST00000384602 108 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RNU4-26P-201ENST00000410270 107 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 ABCF2P2-201ENST00000450549 296 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 RPS29P2-201ENST00000479278 136 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AC068305.1-201ENST00000497406 726 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AC116562.3-201ENST00000506136 177 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RPL23AP94-201ENST00000512518 302 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 RN7SKP83-201ENST00000516512 178 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AC068587.5-201ENST00000528506 175 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AC005868.1-201ENST00000536421 331 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
GRIN3BO60391 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.31□□□□□ -1.56
GRIN3BO60391 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.31□□□□□ -1.56
GRIN3BO60391 AC120057.2-201ENST00000571520 271 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 MIR4775-201ENST00000581168 75 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.31□□□□□ -1.56
GRIN3BO60391 AC104237.2-201ENST00000612456 443 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 uc_338.11-201ENST00000619132 160 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 ZNF734P-201ENST00000419494 1534 ntBASIC5.31□□□□□ -1.56
GRIN3BO60391 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.31□□□□□ -1.56
GRIN3BO60391 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
GRIN3BO60391 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 AL672167.1-204ENST00000641875 3017 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 RNU6-552P-201ENST00000362869 119 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
GRIN3BO60391 Y_RNA.384-201ENST00000383909 102 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 RNU6-903P-201ENST00000391270 109 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 RNU2-29P-201ENST00000410423 189 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 RNA5SP296-201ENST00000410523 111 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 Y_RNA.615-201ENST00000410769 117 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 OR1AA1P-201ENST00000419597 916 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AC236972.2-201ENST00000434979 310 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.3□□□□□ -1.56
GRIN3BO60391 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.3□□□□□ -1.56
GRIN3BO60391 AC016696.1-201ENST00000446949 318 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AC006480.1-201ENST00000449887 378 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 AC110792.1-201ENST00000491826 472 ntBASIC5.3□□□□□ -1.56
GRIN3BO60391 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC5.3□□□□□ -1.56
GRIN3BO60391 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms