Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RNU6-845P-201ENST00000362578 103 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.86-201ENST00000363020 111 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.142-201ENST00000363491 102 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RNU5A-8P-201ENST00000364102 114 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RNA5SP509-201ENST00000364577 119 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 Y_RNA.509-201ENST00000384506 99 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RNU2-15P-201ENST00000410692 191 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 OR9R1P-201ENST00000412200 877 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 HMGN1P24-201ENST00000412282 298 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC011933.1-201ENST00000413334 321 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC004552.1-201ENST00000419089 348 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RPS15AP12-201ENST00000419498 388 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 SDCBPP3-201ENST00000419629 891 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 TIMM9P1-201ENST00000436122 256 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 USP9YP7-201ENST00000436723 430 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 USP9YP32-201ENST00000452432 430 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC116533.1-201ENST00000459748 321 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RPS26P3-201ENST00000470205 348 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AP000926.1-201ENST00000479573 241 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC090543.2-201ENST00000483963 348 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC004057.1-201ENST00000485827 348 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AL139099.1-201ENST00000497398 403 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RPL38P4-201ENST00000502376 214 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 COX7A2P2-201ENST00000505291 250 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC034105.3-201ENST00000565294 442 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 MIR3939-201ENST00000582614 106 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RMST_3.1-201ENST00000611651 109 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC064801.1-201ENST00000612025 407 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC068724.3-201ENST00000625906 87 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 AC099654.10-201ENST00000640395 161 ntBASIC4.25□□□□□ -1.73
CCDC78A2IDD5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC78A2IDD5 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL138713.1-201ENST00000624026 2130 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RNU6-989P-201ENST00000362756 107 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RNU1-14P-201ENST00000362759 152 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RNY4P16-201ENST00000364768 94 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RNU6-116P-201ENST00000384042 109 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL354719.1-201ENST00000406535 843 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 FTH1P6-201ENST00000430768 320 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RNU7-63P-201ENST00000459054 62 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC109327.1-201ENST00000471666 403 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 PCBP2P3-201ENST00000509726 843 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 FTH1P21-201ENST00000512179 511 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC105417.1-201ENST00000514691 285 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RN7SKP21-201ENST00000516503 220 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 OR5AL2P-201ENST00000532185 920 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC78A2IDD5 MIR3138-201ENST00000585238 82 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 VN1R80P-201ENST00000597126 338 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC004908.2-201ENST00000609090 574 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AL391813.2-201ENST00000609113 322 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC006329.2-201ENST00000611491 394 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC007742.2-201ENST00000618226 398 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 RMST_9.1-201ENST00000619945 193 ntBASIC4.24□□□□□ -1.73
CCDC78A2IDD5 AC002550.2-201ENST00000621246 394 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms