Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 HSPA8P4-201ENST00000511877 1920 ntBASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.6□□□□□ -2.15
TCRBV3S1A0A5B6 AC123912.3-201ENST00000600907 1367 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 MIR676-201ENST00000390702 67 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 RNA5SP354-201ENST00000391247 136 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 PRRC2CP1-201ENST00000404428 159 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 CIR1P3-201ENST00000405137 479 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 RNU4-78P-201ENST00000410940 126 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 RPL23AP39-201ENST00000415533 405 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 PGBD4P6-201ENST00000421501 610 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 TMEM167AP1-201ENST00000423409 219 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC007560.1-201ENST00000426912 237 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC009414.1-201ENST00000427200 443 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AL160175.1-201ENST00000428124 247 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AL645568.3-201ENST00000433683 316 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 ARF4P4-201ENST00000439608 520 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 OR6K5P-201ENST00000447050 945 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 FABP5P13-201ENST00000452144 328 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AL359385.1-201ENST00000456509 365 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 RN7SKP283-201ENST00000517197 270 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC068339.2-201ENST00000534395 618 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AL512310.1-201ENST00000548639 172 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC023824.2-201ENST00000566185 400 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC090751.1-201ENST00000566966 267 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC106734.1-201ENST00000568646 663 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AL669831.4-202ENST00000590817 238 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC107214.2-201ENST00000608204 634 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 AC091932.3-201ENST00000624223 323 ntBASIC1.59□□□□□ -2.15
TCRBV3S1A0A5B6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TCRBV3S1A0A5B6 MTND5P28-201ENST00000438005 1594 ntBASIC1.59□□□□□ -2.16
TCRBV3S1A0A5B6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
TCRBV3S1A0A5B6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.59□□□□□ -2.16
TCRBV3S1A0A5B6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
TCRBV3S1A0A5B6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 RNA5SP258-201ENST00000362750 119 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL023807.1-201ENST00000407932 359 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 RNU2-17P-201ENST00000410290 190 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL139413.1-201ENST00000421309 217 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AC004866.2-201ENST00000438285 481 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 OSTCP8-201ENST00000445117 448 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 OR52A4P-203ENST00000498233 1014 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AC096751.1-202ENST00000502691 1067 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 HMGB3P17-201ENST00000504195 649 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 COX6B1P6-201ENST00000522347 255 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AP005435.4-201ENST00000529514 284 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AC139103.1-201ENST00000534696 1030 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 MIR3200-201ENST00000580767 85 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 OR10AB1P-201ENST00000609613 938 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AC097372.4-201ENST00000625025 466 ntBASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.58□□□□□ -2.16
TCRBV3S1A0A5B6 AL390862.1-201ENST00000635467 1469 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RNU6-374P-201ENST00000364146 108 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RPL7P27-201ENST00000403775 720 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC006548.1-201ENST00000427470 102 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL451062.2-201ENST00000427515 271 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL831737.1-201ENST00000441288 271 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 RNA5SP233-201ENST00000459153 113 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC104629.2-201ENST00000468627 598 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC128713.1-201ENST00000471495 306 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC108157.1-201ENST00000510511 539 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 SNORA31.18-201ENST00000517043 134 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 GLYCAM1-201ENST00000546596 285 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 SETP7-201ENST00000552169 453 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC023158.1-201ENST00000561632 1025 ntBASIC1.57□□□□□ -2.16
TCRBV3S1A0A5B6 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms