Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 OR1L1-202ENST00000373686 1083 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 SNORD116-23-201ENST00000384645 92 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-1197P-201ENST00000391183 107 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AL121978.1-201ENST00000402778 359 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AL139098.1-201ENST00000407291 389 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 FCF1P2-201ENST00000415284 583 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC246680.2-201ENST00000422106 389 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 ARPC3P1-201ENST00000437218 533 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 RPL23AP16-201ENST00000441715 421 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 OR51B8P-201ENST00000449892 769 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 MTCO3P2-201ENST00000457365 171 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 PNPLA4P1-201ENST00000458328 305 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 RNU7-140P-201ENST00000459546 60 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 RN7SL636P-201ENST00000497504 294 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC093767.1-201ENST00000504523 156 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC026436.1-201ENST00000510537 270 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC113155.1-201ENST00000511141 769 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-885P-201ENST00000516607 104 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 CASP1P1-201ENST00000526345 212 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 ZNF705CP-201ENST00000530515 889 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 ACTR3BP3-201ENST00000565577 979 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC025281.1-201ENST00000567026 265 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 GAS5-AS1-201ENST00000602767 694 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 DUXAP3-201ENST00000603616 594 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AP000254.1-201ENST00000609934 520 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 VN1R7P-201ENST00000619242 903 ntBASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV41A0A0B4J266 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-461P-201ENST00000364195 107 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-115P-201ENST00000364310 107 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-650P-201ENST00000365658 111 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 SNORA36C-201ENST00000384289 132 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RNA5SP181-201ENST00000410246 98 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC009414.1-201ENST00000427200 443 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AL445687.1-201ENST00000439946 251 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AL096803.2-201ENST00000450032 677 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 NDUFA5P7-201ENST00000452914 242 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 SNORA59A-201ENST00000459326 152 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC087588.1-201ENST00000462203 316 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 OR52A4P-202ENST00000481634 799 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RPL30P5-201ENST00000494923 336 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC048346.1-201ENST00000510247 144 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 RNA5SP471-201ENST00000516971 106 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AL731537.2-201ENST00000561565 951 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC105137.2-201ENST00000569073 466 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC061975.8-201ENST00000587058 721 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AL160237.3-201ENST00000604114 1013 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC067747.1-201ENST00000608026 250 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 UCA1.1-201ENST00000620952 75 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC016717.2-201ENST00000609089 5141 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 AC069528.2-201ENST00000624849 1991 ntBASIC1.87□□□□□ -2.11
TRAV41A0A0B4J266 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 MIR449A-201ENST00000362113 91 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-582P-201ENST00000362989 107 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 RNU6-251P-201ENST00000363235 104 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 SNORA68.1-201ENST00000364537 132 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 U8.8-201ENST00000365399 135 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 SNORA51.6-201ENST00000384151 125 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 AL024474.1-201ENST00000404655 591 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 RPS4XP7-201ENST00000406274 780 ntBASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.86□□□□□ -2.11
TRAV41A0A0B4J266 MTATP6P11-201ENST00000428071 670 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms