Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 CDC42P4-201ENST00000510507 563 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 HMGB3P3-201ENST00000510526 400 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 RNA5SP135-201ENST00000517019 125 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 MTCO1P47-201ENST00000523889 1271 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 SULT1C2P1-202ENST00000562418 459 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AC093519.1-201ENST00000566109 298 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AC011260.1-201ENST00000578420 472 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 AL161629.2-201ENST00000615347 275 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 MIR6852-201ENST00000621699 66 ntBASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.41□□□□□ -2.02
USH1CQ9Y6N9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
USH1CQ9Y6N9 MTND4P21-201ENST00000453886 1357 ntBASIC2.4□□□□□ -2.02
USH1CQ9Y6N9 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 RNU6-882P-201ENST00000391025 103 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL136133.1-201ENST00000413694 376 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 RPL27AP8-201ENST00000424277 446 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL512661.1-201ENST00000434586 1253 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 Z82190.1-201ENST00000454534 490 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 PNPLA4P1-201ENST00000458328 305 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 RNU7-140P-201ENST00000459546 60 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AC026801.2-201ENST00000515352 425 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AC008127.2-201ENST00000549925 1075 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AC061975.8-201ENST00000587058 721 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL121917.1-203ENST00000605534 577 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 AL356585.4-201ENST00000623078 1229 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 MTCO1P23-201ENST00000415223 1526 ntBASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.4□□□□□ -2.03
USH1CQ9Y6N9 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AL360182.1-201ENST00000397433 468 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 WARS2P1-201ENST00000429678 537 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 GXYLT1P1-201ENST00000446657 490 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 DPPA3P1-201ENST00000448050 469 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 RFC5P1-201ENST00000454419 874 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 MTND2P30-201ENST00000456663 382 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 RPL31P60-201ENST00000478450 367 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 TTC39CP1-201ENST00000512513 755 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 CASP1P1-201ENST00000526345 212 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC068339.2-201ENST00000534395 618 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC007115.1-201ENST00000546853 234 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC121758.2-201ENST00000553271 193 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 LINC00557-201ENST00000563184 1279 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AL136363.1-201ENST00000605349 337 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC097504.2-201ENST00000608088 454 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AP000254.1-201ENST00000609934 520 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC068880.5-201ENST00000624331 290 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AC087359.1-201ENST00000508335 1740 ntBASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
USH1CQ9Y6N9 AL359693.1-201ENST00000614959 2407 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 RNU6-1197P-201ENST00000391183 107 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 MTND3P20-201ENST00000407663 186 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 ATP5F1P1-201ENST00000433775 569 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 RSL24D1P8-201ENST00000434442 492 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AL031659.1-201ENST00000447075 539 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 MTCO1P48-201ENST00000448024 1096 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC092798.1-201ENST00000458542 409 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 RPL32P14-201ENST00000463196 378 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC104164.3-201ENST00000467363 1258 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 UBE2DNL-203ENST00000474922 222 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC090096.1-201ENST00000489168 390 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 SETP12-201ENST00000514068 805 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC096725.1-201ENST00000514266 313 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 OR5AK1P-201ENST00000524837 922 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC024224.1-201ENST00000538284 609 ntBASIC2.38□□□□□ -2.03
USH1CQ9Y6N9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms