Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC073073.2-201ENST00000609827 2578 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RNY4P24-201ENST00000362735 96 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 U8.14-201ENST00000390843 143 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RNU6-278P-201ENST00000390945 109 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 CCNG1P1-201ENST00000406783 885 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RPL23AP39-201ENST00000415533 405 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AL451054.2-201ENST00000420896 202 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RPL7P46-201ENST00000425129 740 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 USP12PX-201ENST00000432383 1057 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 ARPC3P1-201ENST00000437218 533 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 MTCYBP39-201ENST00000437562 491 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 BMI1P1-201ENST00000445879 941 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 DDX3P2-201ENST00000446138 111 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 GAPDHP27-201ENST00000447427 1020 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC093392.2-201ENST00000450682 337 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RPL7P15-201ENST00000461190 712 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC004801.2-202ENST00000463559 283 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RPS20P22-201ENST00000473700 357 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RPL23AP41-201ENST00000484754 458 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC034105.3-201ENST00000565294 442 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 RMST_8.1-201ENST00000610287 165 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC097655.1-201ENST00000635075 318 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC007671.2-201ENST00000637344 619 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 AC058791.1-201ENST00000608412 3198 ntBASIC2.92□□□□□ -1.94
FOXA2Q9Y261 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
FOXA2Q9Y261 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC091564.4-201ENST00000533934 2194 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL161912.2-201ENST00000565707 3007 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 MIR184-201ENST00000384962 84 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 U3.39-201ENST00000408569 239 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL158071.1-201ENST00000430315 461 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC007389.2-201ENST00000434630 306 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC129850.1-201ENST00000436203 508 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LARP1BP3-201ENST00000437229 869 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 NOTCH2P1-201ENST00000443481 624 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 KC877373.1-201ENST00000479066 408 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC055855.1-201ENST00000489563 579 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC112673.1-201ENST00000513168 575 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 RNU2-27P-201ENST00000516185 142 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AP006245.1-201ENST00000522549 120 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 ATP5F1P5-201ENST00000526403 760 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC123904.3-201ENST00000547218 814 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 TGIF1P1-201ENST00000558095 802 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 MIR4307-201ENST00000582802 84 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 BNIP3P38-201ENST00000601117 544 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC004696.1-201ENST00000614345 607 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC012150.2-201ENST00000621300 544 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC022336.2-201ENST00000568966 2538 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
FOXA2Q9Y261 AC093908.1-201ENST00000623125 8092 ntBASIC2.91□□□□□ -1.94
FOXA2Q9Y261 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms