Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 RNU2-15P-201ENST00000410692 191 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 LUZP4P1-201ENST00000415420 344 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AL096701.2-201ENST00000416920 238 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 EZH2P1-201ENST00000431167 291 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 GTF2IP7-202ENST00000436677 309 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 VN1R10P-201ENST00000447106 875 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AC092757.1-201ENST00000467293 467 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AC096571.1-202ENST00000506634 735 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 RNU6-415P-201ENST00000516252 97 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 RNU6-1261P-201ENST00000517194 104 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 OR5AK1P-201ENST00000524837 922 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MIR3912-201ENST00000577566 105 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 RPL23AP92-201ENST00000603609 255 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 HSPE1P7-201ENST00000604681 321 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MIR8057-201ENST00000620957 69 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 MKKS-204ENST00000639674 192 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AC109315.1-201ENST00000584143 1347 ntBASIC3.19□□□□□ -1.9
SMC3Q9UQE7 AP005901.5-201ENST00000545779 1796 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 ZNF29P-201ENST00000225587 168 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 Y_RNA.25-201ENST00000362528 102 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 Y_RNA.472-201ENST00000384322 102 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC112220.1-201ENST00000434628 355 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 RPL36AP6-201ENST00000435770 321 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 USP9YP22-201ENST00000438971 294 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 EXOSC3P1-201ENST00000448649 500 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC104164.3-201ENST00000467363 1258 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC010460.2-201ENST00000509054 677 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC010625.1-201ENST00000511296 403 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 OR7K1P-201ENST00000546439 926 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 SETP7-201ENST00000552169 453 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 GTF2IP8-201ENST00000560687 584 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC138915.2-201ENST00000569776 97 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 BNIP3P22-201ENST00000593399 556 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AL390838.2-201ENST00000602394 274 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 MTND3P19-201ENST00000603825 345 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC024060.1-201ENST00000607052 494 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AL161734.1-201ENST00000609720 557 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC009237.15-201ENST00000610252 501 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC005332.6-201ENST00000613178 446 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 TAB3P1-202ENST00000452645 1634 ntBASIC3.18□□□□□ -1.9
SMC3Q9UQE7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.18□□□□□ -1.9
SMC3Q9UQE7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 SNORA18.3-201ENST00000384122 132 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 RNU6-882P-201ENST00000391025 103 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 RNU6-1242P-201ENST00000391052 103 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL513175.2-201ENST00000422071 443 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL139132.1-201ENST00000431587 344 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 GTF2IP3-201ENST00000433887 494 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 RFC5P1-201ENST00000454419 874 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC092798.1-201ENST00000458542 409 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC025881.1-201ENST00000518851 512 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC021451.1-201ENST00000523498 1129 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 MTCO1P47-201ENST00000523889 1271 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC008739.2-201ENST00000597006 317 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AP000787.2-201ENST00000604432 568 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 AC069545.1-201ENST00000605671 358 ntBASIC3.17□□□□□ -1.9
SMC3Q9UQE7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms