Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 DEFB108D-201ENST00000527787 222 ntBASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC104260.2-201ENST00000623551 3497 ntBASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC005332.5-201ENST00000591222 2919 ntBASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.1□□□□□ -1.59
AP4E1Q9UPM8 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC008758.3-201ENST00000507003 1829 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RN7SKP95-201ENST00000362860 303 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RNU6-946P-201ENST00000383878 107 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 Y_RNA.396-201ENST00000383949 103 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 Y_RNA.428-201ENST00000384078 102 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RNU6-95P-201ENST00000384697 107 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RN7SKP159-201ENST00000410657 292 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 TBCAP2-201ENST00000416175 326 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RPL10P17-201ENST00000453852 316 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RPL7AP6-201ENST00000477943 801 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RN7SL808P-201ENST00000496066 299 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC022493.2-201ENST00000506122 481 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 SCARNA16.2-201ENST00000516520 172 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RNU6-1332P-201ENST00000516666 104 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC022882.1-201ENST00000532142 501 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 SETP7-201ENST00000552169 453 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 RPL23AP84-201ENST00000571193 464 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC092447.9-201ENST00000603395 144 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC078938.1-201ENST00000620993 318 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AL161637.1-201ENST00000622380 412 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 AC116667.1-201ENST00000604855 2072 ntBASIC5.09□□□□□ -1.59
AP4E1Q9UPM8 MTCO1P24-201ENST00000515438 1558 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC099654.2-201ENST00000433031 1980 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 Y_RNA.489-201ENST00000384410 101 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 SNORA70-201ENST00000384436 135 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNU6-823P-201ENST00000391042 103 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNU6-754P-201ENST00000391166 107 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 SPTLC1P2-201ENST00000407089 121 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNU4-61P-201ENST00000411243 107 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RPL21P109-201ENST00000422213 475 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC099336.2-201ENST00000422457 254 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 FAR2P4-202ENST00000425399 584 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AL360081.1-201ENST00000428299 555 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 ARL5AP4-201ENST00000430731 512 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RPL23AP69-201ENST00000431134 458 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC093414.1-201ENST00000434712 514 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 CEACAMP7-201ENST00000444105 496 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 GAPDHP27-201ENST00000447427 1020 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 PCNPP5-201ENST00000452246 481 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC099560.2-201ENST00000457554 255 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 HMGB3P30-201ENST00000457863 606 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 SNORD5.1-201ENST00000458800 75 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 snoU13.20-201ENST00000459180 104 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC087884.1-201ENST00000469738 328 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNU2-69P-201ENST00000516061 100 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNA5SP384-201ENST00000516615 116 ntBASIC5.08□□□□□ -1.6
AP4E1Q9UPM8 RNA5SP392-201ENST00000516905 112 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms