Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AL049780.3-201ENST00000624612 1583 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 RNU6-28P-201ENST00000362378 107 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 SNORA48.5-201ENST00000391143 135 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 BX842559.1-201ENST00000419615 532 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 USP9YP28-201ENST00000435142 589 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC091862.1-201ENST00000438016 1100 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 SDCBPP1-201ENST00000440192 890 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 MTCO1P42-201ENST00000457379 726 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 VN1R17P-201ENST00000472048 1090 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC096751.1-202ENST00000502691 1067 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC026784.1-201ENST00000507986 352 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 MTND4LP18-201ENST00000526864 291 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC103843.2-201ENST00000530523 682 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC109635.4-202ENST00000531666 412 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 EIF1P4-201ENST00000572664 335 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 MIR4528-201ENST00000577763 90 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 SEPT7P9-203ENST00000604116 343 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 NDUFA8P1-201ENST00000605525 367 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC091965.4-201ENST00000607691 587 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AC138932.5-201ENST00000617759 563 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 AL596245.1-201ENST00000618994 362 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 MIR8057-201ENST00000620957 69 ntBASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.45□□□□□ -1.7
HDAC9Q9UKV0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 SNORD9-201ENST00000362566 104 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 RNU6-533P-201ENST00000384144 107 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.510-201ENST00000384511 114 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 SOD2P1-201ENST00000396543 562 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 MIR1289-1-201ENST00000408836 144 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 MIR1183-201ENST00000408856 89 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 RNU2-66P-201ENST00000410650 161 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.619-201ENST00000410951 90 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 RN7SKP284-201ENST00000411002 343 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AIMP1P1-201ENST00000418670 937 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL590365.1-201ENST00000450788 243 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AP001025.2-201ENST00000490908 477 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC139783.2-201ENST00000504847 1145 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 CDC42P4-201ENST00000510507 563 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC022878.1-201ENST00000530684 149 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AP002453.2-201ENST00000533503 320 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC006116.10-201ENST00000591836 581 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC073648.5-201ENST00000603502 305 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC112191.3-201ENST00000604371 277 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL137849.1-201ENST00000604767 169 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL590282.1-201ENST00000610379 1136 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL589743.7-201ENST00000612637 233 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AL355365.1-201ENST00000616480 294 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC099654.13-201ENST00000639774 207 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 AC092447.10-201ENST00000620607 1652 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 MAPK10-253ENST00000641010 4072 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.44□□□□□ -1.7
HDAC9Q9UKV0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC066616.2-201ENST00000559334 1481 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AL161781.1-201ENST00000354277 403 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.3-201ENST00000362331 103 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RNU6-600P-201ENST00000362524 99 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.41-201ENST00000362646 102 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 RNU6-989P-201ENST00000362756 107 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 SNORA40.3-201ENST00000390964 122 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 Y_RNA.608-201ENST00000410647 95 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 TOMM22P1-201ENST00000418578 312 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AC010975.2-201ENST00000427781 588 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 HMGB1P12-201ENST00000438594 598 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 PGBD4P3-201ENST00000440731 581 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 HMGB1P15-201ENST00000453854 435 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 Z82190.1-201ENST00000454534 490 ntBASIC4.43□□□□□ -1.7
HDAC9Q9UKV0 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 141.1 ms