Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC069304.2-201ENST00000605154 435 ntBASIC2.54□□□□□ -2
DUX4Q9UBX2 AL133507.1-201ENST00000605269 557 ntBASIC2.54□□□□□ -2
DUX4Q9UBX2 AL020991.1-201ENST00000612314 373 ntBASIC2.54□□□□□ -2
DUX4Q9UBX2 AC007318.2-201ENST00000620999 243 ntBASIC2.54□□□□□ -2
DUX4Q9UBX2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.54□□□□□ -2
DUX4Q9UBX2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.54□□□□□ -2
DUX4Q9UBX2 AC006378.2-201ENST00000623178 2476 ntBASIC2.54□□□□□ -2
DUX4Q9UBX2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.54□□□□□ -2
DUX4Q9UBX2 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.54□□□□□ -2
DUX4Q9UBX2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
DUX4Q9UBX2 CDR1-202ENST00000625883 1485 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
DUX4Q9UBX2 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
DUX4Q9UBX2 FRG1BP-201ENST00000278882 761 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 MIR22-201ENST00000362190 85 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 MIR422A-201ENST00000362286 90 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.53□□□□□ -2
DUX4Q9UBX2 DEFA7P-201ENST00000382676 285 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 RNU1-109P-201ENST00000383960 147 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 RNU6-1197P-201ENST00000391183 107 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 MTATP6P27-201ENST00000416987 621 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 ATG3P1-201ENST00000419507 911 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.53□□□□□ -2
DUX4Q9UBX2 AC007435.1-201ENST00000421086 415 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 HMGN2P30-201ENST00000423237 256 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 UBE2DNL-203ENST00000474922 222 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AC008427.1-201ENST00000503102 655 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AC006445.2-201ENST00000510061 472 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 MTND2P7-201ENST00000521337 640 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AP000857.1-201ENST00000532151 543 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.53□□□□□ -2
DUX4Q9UBX2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.53□□□□□ -2
DUX4Q9UBX2 AC138761.3-201ENST00000579993 334 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.53□□□□□ -2
DUX4Q9UBX2 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.53□□□□□ -2
DUX4Q9UBX2 AC006539.2-201ENST00000601729 572 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AC096947.1-201ENST00000603233 470 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AC093673.2-201ENST00000609674 331 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 AL512427.1-201ENST00000618593 349 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
DUX4Q9UBX2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
DUX4Q9UBX2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.53□□□□□ -2
DUX4Q9UBX2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
DUX4Q9UBX2 AP003122.5-201ENST00000527668 3766 ntBASIC2.53□□□□□ -2.01
DUX4Q9UBX2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
DUX4Q9UBX2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
DUX4Q9UBX2 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC005539.1-201ENST00000443768 1479 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 ASNSP3-201ENST00000451989 1306 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 SNRPEP2-201ENST00000397592 279 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 RPL7P8-201ENST00000411964 730 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 CCDC58P2-201ENST00000417131 366 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC236972.1-201ENST00000433225 199 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 RPL23AP58-201ENST00000440453 469 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 RPL26P6-201ENST00000440913 438 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC005297.2-201ENST00000450430 606 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC010099.1-201ENST00000455434 375 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AL031183.1-201ENST00000457667 207 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC117440.1-201ENST00000474107 571 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 OR4G11P-201ENST00000492842 939 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC023424.2-201ENST00000493479 777 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC016550.1-201ENST00000505348 785 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 TBCAP3-201ENST00000512475 312 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 RN7SKP31-201ENST00000516354 278 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 SNORA9.3-201ENST00000516383 129 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AP003102.1-201ENST00000525638 661 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 CASP1P1-201ENST00000526345 212 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC090695.1-201ENST00000561269 1222 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 CRYM-AS1-204ENST00000637983 556 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 TPTE2P4-201ENST00000258589 1605 ntBASIC2.52□□□□□ -2.01
DUX4Q9UBX2 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
DUX4Q9UBX2 SDAD1P2-201ENST00000441308 2028 ntBASIC2.51□□□□□ -2.01
DUX4Q9UBX2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.51□□□□□ -2.01
DUX4Q9UBX2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.51□□□□□ -2.01
DUX4Q9UBX2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
DUX4Q9UBX2 UBA52P6-201ENST00000399822 382 ntBASIC2.51□□□□□ -2.01
DUX4Q9UBX2 RPL7P25-201ENST00000404151 721 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms