Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 MIR4658-201ENST00000584344 65 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 BX322635.1-201ENST00000605804 496 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 SDAD1P2-201ENST00000441308 2028 ntBASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS29Q9UBQ0 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 Z82209.1-201ENST00000422141 2135 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 SNORA67.4-201ENST00000384688 142 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 MIR767-201ENST00000390228 109 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AL445687.1-201ENST00000439946 251 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 RPL31P50-201ENST00000471002 296 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 RBM43P1-201ENST00000476891 1081 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC004263.1-201ENST00000479327 332 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AL049873.1-201ENST00000480540 376 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 HMGB3P3-201ENST00000510526 400 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 SUB1P1-201ENST00000524415 382 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC007115.1-201ENST00000546853 234 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC009097.3-201ENST00000563557 1018 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC009831.4-201ENST00000620744 325 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC008568.2-201ENST00000623862 2313 ntBASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VPS29Q9UBQ0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 CR848007.1-201ENST00000442354 1699 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 WASF1P1-201ENST00000447560 1131 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 RPL23AP23-201ENST00000452590 471 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC087588.1-201ENST00000462203 316 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC093767.1-201ENST00000504523 156 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 RNA5SP281-201ENST00000516504 135 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 GLYCAM1-201ENST00000546596 285 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC007938.3-201ENST00000604965 623 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC013562.2-201ENST00000611632 603 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC004852.3-201ENST00000614131 326 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 AC008432.1-201ENST00000615912 1320 ntBASIC2.13□□□□□ -2.07
VPS29Q9UBQ0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 RNU6-1155P-201ENST00000363554 107 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC011753.1-201ENST00000451001 220 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 RPL31P60-201ENST00000478450 367 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 RPL30P5-201ENST00000494923 336 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 EIF4EP3-201ENST00000498782 656 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC114322.1-201ENST00000506771 926 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC006390.1-201ENST00000508068 283 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 COX6CP5-201ENST00000527162 228 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 AC068339.2-201ENST00000534395 618 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 TRAV28-201ENST00000557548 323 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 MIR5694-201ENST00000581190 76 ntBASIC2.12□□□□□ -2.07
VPS29Q9UBQ0 MIR3117-201ENST00000584034 78 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms