Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 Y_RNA.530-201ENST00000384587 101 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL590004.1-201ENST00000405321 300 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU2-36P-201ENST00000410361 191 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 BTF3L4P3-201ENST00000418879 476 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL451054.2-201ENST00000420896 202 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC009963.2-201ENST00000453431 138 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 SNRPFP3-201ENST00000457792 225 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU7-180P-201ENST00000459240 63 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 SNORD108-201ENST00000459332 71 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SL41P-201ENST00000476144 297 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC092436.1-201ENST00000506450 503 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-1092P-201ENST00000516955 87 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC103843.2-201ENST00000530523 682 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AP001781.1-201ENST00000530977 207 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC069061.3-201ENST00000582254 823 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL161729.3-201ENST00000603533 673 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC012443.1-201ENST00000605605 231 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC090948.1-201ENST00000607464 549 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC068831.8-201ENST00000620171 435 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL136313.1-201ENST00000624804 202 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AC055839.1-201ENST00000634467 498 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 AL137003.2-201ENST00000606924 2538 ntBASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.7□□□□□ -1.66
PPARGC1AQ9UBK2 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 PNPT1P2-201ENST00000456768 2050 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC026951.1-201ENST00000559530 2459 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 CPHL1P-201ENST00000461341 3407 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.58-201ENST00000362807 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.67-201ENST00000362870 100 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.154-201ENST00000363624 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.184-201ENST00000363884 108 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RNY3P1-201ENST00000365085 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.315-201ENST00000365117 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RNY3-201ENST00000365484 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.490-201ENST00000384413 102 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RNU11-4P-201ENST00000391149 133 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RNU2-47P-201ENST00000410649 186 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.615-201ENST00000410769 117 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RPS7P15-201ENST00000415804 584 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 PDSS1P1-201ENST00000422953 1114 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC245028.1-201ENST00000423259 256 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 NDUFA5P4-201ENST00000436704 385 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AL590639.1-201ENST00000456484 337 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC008897.1-201ENST00000494006 347 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC117522.3-201ENST00000507974 584 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 KLHL2P1-201ENST00000508691 521 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 RN7SKP92-201ENST00000517266 244 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 SCOCP1-201ENST00000554676 349 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 MTCO3P13-201ENST00000577757 781 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 MIR4700-201ENST00000578311 74 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 AC067931.1-201ENST00000624190 671 ntBASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PPARGC1AQ9UBK2 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL645937.1-201ENST00000641739 1652 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.387-201ENST00000383918 102 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 RNU6-1013P-201ENST00000384180 107 ntBASIC4.68□□□□□ -1.66
PPARGC1AQ9UBK2 Y_RNA.493-201ENST00000384422 102 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms