Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 AL139395.1-201ENST00000603662 160 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC008277.2-201ENST00000605196 797 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AC092794.1-201ENST00000612734 582 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 U6atac.1-201ENST00000616025 117 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 uc_338.12-201ENST00000616344 181 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 U4.5-201ENST00000617137 123 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 AL603758.1-201ENST00000618654 241 ntBASIC4.22□□□□□ -1.73
COL20A1Q9P218 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL20A1Q9P218 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.22□□□□□ -1.73
COL20A1Q9P218 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
COL20A1Q9P218 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL20A1Q9P218 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC004925.1-201ENST00000624256 2706 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL20A1Q9P218 SNORD9-201ENST00000362566 104 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RNU6-335P-201ENST00000364563 113 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RNY4P16-201ENST00000364768 94 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 RNA5SP424-201ENST00000390988 115 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RNU6-195P-201ENST00000411352 109 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RPS29P4-201ENST00000414733 161 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RAD23BP2-201ENST00000416003 1207 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC092832.1-201ENST00000422934 400 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC019097.1-201ENST00000424783 735 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 ISCA1P1-201ENST00000426679 387 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC087650.1-201ENST00000431445 468 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 MTND1P4-201ENST00000435196 415 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RPS3AP46-201ENST00000448352 682 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 TRBV12-2-201ENST00000489763 344 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL20A1Q9P218 RPL9P6-201ENST00000492764 598 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC025445.1-201ENST00000502728 300 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC108078.1-201ENST00000508073 725 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC026801.2-201ENST00000515352 425 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RN7SKP13-201ENST00000515933 244 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 RN7SKP18-201ENST00000516005 275 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 OR5G4P-201ENST00000525251 760 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AL133271.1-201ENST00000538229 291 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 OR4T1P-201ENST00000554933 911 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 OR4K8P-201ENST00000578842 1048 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 AP001429.1-201ENST00000602568 530 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC107304.1-201ENST00000604229 296 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC012468.1-201ENST00000604888 430 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC245517.5-201ENST00000611529 162 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC093838.1-201ENST00000613014 469 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AL732618.1-201ENST00000623251 301 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 AC068880.5-201ENST00000624331 290 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 SEPT14P19-203ENST00000633205 211 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 MIR4275-201ENST00000636486 87 ntBASIC4.21□□□□□ -1.74
COL20A1Q9P218 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL20A1Q9P218 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.21□□□□□ -1.74
COL20A1Q9P218 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 RNU5E-1-201ENST00000362477 120 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 MIR183-201ENST00000384958 110 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 MIR93-201ENST00000385024 80 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL20A1Q9P218 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 MTND3P17-201ENST00000416968 344 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 RPS15AP12-201ENST00000419498 388 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC245054.1-201ENST00000420944 258 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC133104.1-201ENST00000429100 218 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 FCF1P1-201ENST00000432690 571 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC104850.1-201ENST00000435940 476 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 HMGB3P30-201ENST00000457863 606 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC093899.1-201ENST00000457984 376 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 AC126182.1-201ENST00000478134 357 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.2□□□□□ -1.74
COL20A1Q9P218 HMGB1P29-201ENST00000505659 499 ntBASIC4.2□□□□□ -1.74
COL20A1Q9P218 SNORA70.18-201ENST00000516696 98 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms