Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AC090136.1-201ENST00000520009 240 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AP002404.1-201ENST00000532005 451 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AC092451.2-201ENST00000538746 658 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.46□□□□□ -2.02
CLN6Q9NWW5 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.46□□□□□ -2.02
CLN6Q9NWW5 ACTR3BP3-201ENST00000565577 979 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AC126365.2-201ENST00000580630 379 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AL450472.3-201ENST00000615578 367 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AC253576.2-201ENST00000618815 580 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AL596245.1-201ENST00000618994 362 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 AP003485.1-201ENST00000625093 753 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.02
CLN6Q9NWW5 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.46□□□□□ -2.02
CLN6Q9NWW5 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
CLN6Q9NWW5 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC109315.1-201ENST00000584143 1347 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC008669.1-201ENST00000565823 2178 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 RNA5SP210-201ENST00000391034 120 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MTCO1P56-201ENST00000401674 224 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 DHFRP6-201ENST00000401776 268 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC019070.1-201ENST00000415008 1024 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 BX682237.1-201ENST00000415016 335 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL096701.2-201ENST00000416920 238 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC007435.1-201ENST00000421086 415 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC112653.1-201ENST00000443851 386 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC009237.8-201ENST00000445492 379 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 HMGN1P5-201ENST00000448591 263 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC016550.1-201ENST00000505348 785 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MTCYBP16-201ENST00000509187 1129 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC017037.2-201ENST00000513850 890 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC026801.2-201ENST00000515352 425 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC090615.1-201ENST00000577519 154 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MIR3912-201ENST00000577566 105 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC008739.3-201ENST00000603262 127 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AL160237.3-201ENST00000604114 1013 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 BNIP3P19-201ENST00000605397 577 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC079597.1-201ENST00000624306 508 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC068880.5-201ENST00000624331 290 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 OR5H6-203ENST00000642105 978 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 MTCO1P9-201ENST00000505577 1534 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 ZNF519P1-201ENST00000449011 1626 ntBASIC2.45□□□□□ -2.02
CLN6Q9NWW5 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CLN6Q9NWW5 AC026241.1-201ENST00000517873 2142 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNU6-28P-201ENST00000362378 107 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 SNORA38.1-201ENST00000364172 131 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNU6-76P-201ENST00000384060 104 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNVU1-14-201ENST00000384770 164 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 MIR7-3-201ENST00000384898 110 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL592310.1-201ENST00000414330 671 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL161449.1-201ENST00000414531 1199 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 MTND4P3-201ENST00000417829 541 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 USP9YP21-201ENST00000420603 432 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 PTP4A1P7-201ENST00000423476 514 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 MTCYBP45-201ENST00000435243 565 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 TAAR7P-201ENST00000436141 242 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 ARPC3P1-201ENST00000437218 533 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 PRSS3P4-201ENST00000453323 162 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNU6-420P-201ENST00000458780 107 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 HSPE1P6-201ENST00000479457 291 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC069528.1-202ENST00000482888 637 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AL049874.1-201ENST00000489560 388 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AP002812.1-201ENST00000495378 474 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC008427.1-201ENST00000503102 655 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.44□□□□□ -2.02
CLN6Q9NWW5 RNU6-1225P-201ENST00000516336 65 ntBASIC2.44□□□□□ -2.02
CLN6Q9NWW5 SNORA74D-201ENST00000516404 141 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms