Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNA5SP143-201ENST00000516936 115 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 OR4R1P-201ENST00000529879 463 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC104383.1-201ENST00000530297 370 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 RPL21P7-201ENST00000557463 483 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC098848.2-201ENST00000588023 330 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC012669.1-201ENST00000603209 283 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 AC103710.2-201ENST00000609912 942 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 MIR6075-201ENST00000620782 95 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.59□□□□□ -1.67
VTA1Q9NP79 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
VTA1Q9NP79 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
VTA1Q9NP79 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.59□□□□□ -1.68
VTA1Q9NP79 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VTA1Q9NP79 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 OR5J1P-201ENST00000313544 939 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 MIR448-201ENST00000362131 111 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 Y_RNA.88-201ENST00000363029 99 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 SNORD56.2-201ENST00000363242 71 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 RNU6-1284P-201ENST00000363701 100 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 U3.15-201ENST00000365398 212 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 MED13P1-201ENST00000428342 171 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL358472.1-201ENST00000431295 329 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 TBCAP1-201ENST00000436520 327 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL662791.1-201ENST00000441992 928 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL500522.2-201ENST00000448562 343 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 RPS3AP50-201ENST00000487064 803 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC020893.1-201ENST00000502452 580 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 RNU7-51P-201ENST00000516560 62 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC091516.1-201ENST00000549191 703 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC025627.2-201ENST00000576220 160 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 AL162413.1-201ENST00000603198 110 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AC010680.3-201ENST00000604215 520 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AP002360.4-201ENST00000606980 481 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 CR392039.5-201ENST00000623201 510 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 AP005264.7-201ENST00000625003 745 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 Z82217.1-201ENST00000625157 8149 ntBASIC4.58□□□□□ -1.68
VTA1Q9NP79 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VTA1Q9NP79 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
VTA1Q9NP79 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VTA1Q9NP79 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 RNU6-511P-201ENST00000363496 107 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 SNORD3H-201ENST00000384486 214 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 RNU6-606P-201ENST00000384721 111 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 FGF7P8-201ENST00000402994 292 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 RNU2-43P-201ENST00000410306 190 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 Y_RNA.604-201ENST00000410574 102 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 EI24P1-201ENST00000416584 867 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC007283.2-201ENST00000424739 197 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 MTCO1P20-201ENST00000425366 358 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 RPL23AP89-201ENST00000439324 255 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC005094.1-201ENST00000440420 368 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AL358232.1-201ENST00000448030 501 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AL121877.1-201ENST00000453704 622 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 RAD23BP3-201ENST00000454157 1152 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 RNU6-261P-201ENST00000459506 102 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 FAM92A1P2-202ENST00000504766 877 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 SLC25A36P1-201ENST00000590111 465 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 GLUD1P4-201ENST00000590914 418 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 NRBF2P5-201ENST00000603087 788 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 MIR7702-201ENST00000621931 59 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 AC055839.1-201ENST00000634467 498 ntBASIC4.57□□□□□ -1.68
VTA1Q9NP79 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VTA1Q9NP79 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms