Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC010653.1-201ENST00000571108 881 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AL451044.1-201ENST00000604867 238 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC011373.1-201ENST00000607270 237 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AL049539.1-201ENST00000611964 459 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC007485.1-201ENST00000616755 206 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 uc_338.11-201ENST00000619132 160 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 AC097461.1-201ENST00000568928 2821 ntBASIC4.27□□□□□ -1.73
SEC61A2Q9H9S3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ZNF734P-201ENST00000419494 1534 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 API5P2-201ENST00000397055 1498 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.158-201ENST00000363651 101 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.212-201ENST00000364177 102 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 SNORD116-11-201ENST00000383882 92 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.557-201ENST00000384680 107 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 RNA5SP219-201ENST00000390940 113 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 EIF4E2P1-201ENST00000393781 255 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MRPL42P3-201ENST00000401492 326 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AP000580.1-201ENST00000404439 358 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 RN7SKP159-201ENST00000410657 292 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 RPL30P2-201ENST00000414021 291 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MCFD2P1-201ENST00000417812 300 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC069213.2-201ENST00000420238 366 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC092013.1-201ENST00000438795 332 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC016696.1-201ENST00000446949 318 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MTND1P17-201ENST00000448961 204 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 RPL12P25-201ENST00000455592 494 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC231760.1-201ENST00000498002 260 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC021146.3-201ENST00000511911 260 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.661-201ENST00000516003 99 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC009902.1-201ENST00000519351 183 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 OR11H5P-201ENST00000554039 926 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC124068.1-201ENST00000563131 678 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MIR4480-201ENST00000582492 71 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC110743.1-201ENST00000584870 478 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ATP1B3P1-201ENST00000605365 821 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC133104.2-201ENST00000615272 193 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL357559.1-201ENST00000622228 274 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC022418.1-201ENST00000624118 445 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL669831.3-213ENST00000636676 183 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC008013.2-202ENST00000637965 364 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 SALL4P2-201ENST00000423288 2910 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AL445487.1-201ENST00000415694 1580 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC104118.1-201ENST00000607625 1589 ntBASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SEC61A2Q9H9S3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AL122126.1-201ENST00000546905 1318 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 CDC27P3-201ENST00000635418 1910 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 ZNF807-201ENST00000328088 1707 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.47-201ENST00000362697 108 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RN7SKP103-201ENST00000363848 320 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC117470.1-201ENST00000381974 330 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 Y_RNA.473-201ENST00000384333 102 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 MIR585-201ENST00000384887 94 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 MIR548F4-201ENST00000408515 105 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 RNU6-954P-201ENST00000411355 107 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AC016769.2-201ENST00000414815 475 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 CBX3P6-201ENST00000430257 527 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 USP9YP16-201ENST00000430287 407 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 AF228730.2-201ENST00000438784 848 ntBASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC4.25□□□□□ -1.73
SEC61A2Q9H9S3 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms