Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AL049838.1-201ENST00000563647 981 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC034268.2-201ENST00000571784 482 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 MIR3944-201ENST00000581277 108 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC245884.10-201ENST00000597355 337 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AL031985.2-201ENST00000600955 480 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC024933.1-201ENST00000608472 348 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC004067.1-201ENST00000608733 700 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC138932.5-201ENST00000617759 563 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC099506.2-201ENST00000623074 221 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 GABRG2-229ENST00000641017 3628 ntBASIC3.12□□□□□ -1.91
DDX47Q9H0S4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
DDX47Q9H0S4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 MTCO1P12-201ENST00000414273 1543 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNU5A-1-201ENST00000362698 116 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNU6-97P-201ENST00000363387 104 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNU6-289P-201ENST00000364093 107 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNA5SP252-201ENST00000391131 119 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RPL7P25-201ENST00000404151 721 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RPL7P8-201ENST00000411964 730 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AL451062.2-201ENST00000427515 271 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AL159987.2-201ENST00000432754 307 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC092573.2-201ENST00000434546 243 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC084290.1-201ENST00000434995 374 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 YWHAZP7-201ENST00000436906 631 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 PRDX3P3-201ENST00000447765 522 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RPL7P18-201ENST00000478965 734 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 HSPE1P6-201ENST00000479457 291 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC110794.1-201ENST00000505816 425 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC104090.1-201ENST00000506341 1171 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 RNU6-798P-201ENST00000516912 103 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 OR5G4P-201ENST00000525251 760 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC074050.1-201ENST00000563247 211 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC011458.1-201ENST00000604034 617 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AL020991.1-201ENST00000612314 373 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC016597.2-201ENST00000613256 341 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AL138880.2-201ENST00000616214 239 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC027309.3-201ENST00000623419 351 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC103988.1-201ENST00000566382 2177 ntBASIC3.11□□□□□ -1.91
DDX47Q9H0S4 AC005832.2-201ENST00000538921 1430 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 RNU6-777P-201ENST00000364265 104 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 RNA5SP72-201ENST00000364442 117 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 SAR1AP2-201ENST00000392696 594 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 MIR1290-201ENST00000408735 78 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 SNRPEP7-201ENST00000438350 220 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 FGF7P5-201ENST00000441829 291 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC104563.1-201ENST00000476147 376 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC021382.1-201ENST00000483523 359 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC006445.2-201ENST00000510061 472 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC024589.1-201ENST00000512207 263 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC091057.2-201ENST00000602594 792 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC024220.1-201ENST00000603675 484 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC106791.2-201ENST00000604680 391 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC090132.2-201ENST00000615881 347 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 AC244100.1-202ENST00000621554 382 ntBASIC3.1□□□□□ -1.91
DDX47Q9H0S4 U6.105-201ENST00000637379 88 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms