Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC096751.1-202ENST00000502691 1067 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 RAC1P5-201ENST00000512182 576 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 AC022069.1-201ENST00000582910 658 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 AC011374.2-201ENST00000607135 526 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
TRIM4Q9C037 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TRIM4Q9C037 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM4Q9C037 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM4Q9C037 SNORD114-1-201ENST00000362705 72 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 RNU6-819P-201ENST00000364116 107 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 RNU1-51P-201ENST00000365345 176 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 RNU1-52P-201ENST00000384190 164 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 FAT1P1-201ENST00000406588 507 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC079780.1-201ENST00000428259 207 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC008427.1-201ENST00000503102 655 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC116337.1-201ENST00000509680 687 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC108157.1-201ENST00000510511 539 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC108729.3-201ENST00000513484 108 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 SNRPGP16-201ENST00000533275 226 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC009063.1-201ENST00000563342 702 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC023043.2-201ENST00000589678 1026 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AC013468.1-201ENST00000608680 598 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM4Q9C037 AL109809.4-201ENST00000603520 2185 ntBASIC2.37□□□□□ -2.03
TRIM4Q9C037 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM4Q9C037 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 SET-203ENST00000372688 801 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 Y_RNA.508-201ENST00000384502 114 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 RNU6-14P-201ENST00000384630 106 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 RNU4-72P-201ENST00000410754 173 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 HMGB3P2-201ENST00000411913 584 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 RPS3AP9-201ENST00000417027 792 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 RPL23AP45-201ENST00000476406 468 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 RN7SL636P-201ENST00000497504 294 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC104057.1-201ENST00000515547 497 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 NDUFS5P6-201ENST00000529136 295 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC018630.1-201ENST00000541376 925 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC078814.3-201ENST00000553036 491 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 RPL23AP84-201ENST00000571193 464 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC008739.2-201ENST00000597006 317 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC025588.3-201ENST00000604182 274 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC106900.2-201ENST00000604994 317 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC018926.3-201ENST00000618841 406 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.36□□□□□ -2.03
TRIM4Q9C037 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.36□□□□□ -2.03
TRIM4Q9C037 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM4Q9C037 RNU4-23P-201ENST00000362839 140 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 RNA5SP456-201ENST00000364002 114 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM4Q9C037 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 MIR518C-201ENST00000384822 101 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM4Q9C037 Y_RNA.595-201ENST00000410403 105 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 RNA5SP445-201ENST00000515889 115 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 RNU6-202P-201ENST00000515998 96 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC103810.1-201ENST00000579873 453 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 NRBF2P1-201ENST00000587407 859 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.35□□□□□ -2.03
TRIM4Q9C037 DPRXP5-201ENST00000604662 539 ntBASIC2.35□□□□□ -2.03
TRIM4Q9C037 VN1R74P-201ENST00000613259 503 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms