Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL157392.4-201ENST00000609756 345 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 SDR42E1P2-201ENST00000614861 481 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC004777.1-201ENST00000624317 287 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 AC010608.3-201ENST00000625048 527 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 MTND5P1-201ENST00000445440 1375 ntBASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHMP4AQ9BY43 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 SNORD46.1-201ENST00000364139 104 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 RNU6-217P-201ENST00000384164 104 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AL109755.1-201ENST00000401791 649 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 HMGN1P24-201ENST00000412282 298 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC093578.1-201ENST00000415219 368 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 RPL7P49-201ENST00000471402 708 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC025518.1-201ENST00000479856 347 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AP000563.1-201ENST00000490865 758 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC110794.1-201ENST00000505816 425 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 OR5BM1P-201ENST00000512021 366 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 APOOP4-201ENST00000513530 597 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 SNORA31.26-201ENST00000517250 137 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC007458.1-201ENST00000542812 373 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AL121576.1-201ENST00000556055 276 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 TGIF1P1-201ENST00000558095 802 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC002545.1-201ENST00000592511 181 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AL035413.2-201ENST00000604801 525 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC239868.4-201ENST00000608318 671 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AC004908.2-201ENST00000609090 574 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 AL356321.1-201ENST00000621360 228 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CHMP4AQ9BY43 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 RPS3AP25-201ENST00000411660 793 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 RAP1BP1-201ENST00000412709 553 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AL358075.3-201ENST00000426289 226 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC008264.1-201ENST00000447612 367 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 RPS26P21-201ENST00000475397 348 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC099489.2-201ENST00000574976 260 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 SRGNP1-201ENST00000603392 451 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 TUG1_2.1-201ENST00000614234 87 ntBASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.38□□□□□ -1.71
CHMP4AQ9BY43 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 RNA5SP267-201ENST00000364893 126 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC110754.1-201ENST00000399740 601 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 HMGB1P49-201ENST00000418882 569 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 BX119904.4-201ENST00000424402 301 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC098614.2-201ENST00000426040 255 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 Z96811.1-201ENST00000445880 108 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 RSL24D1P3-201ENST00000449255 495 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC097262.1-201ENST00000452559 548 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC013267.1-201ENST00000458227 267 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC106872.3-201ENST00000495104 446 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC074250.1-201ENST00000511117 192 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 RNU6-928P-201ENST00000516876 104 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 NRON-201ENST00000517270 370 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 MIR4738-201ENST00000579134 87 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC078899.3-201ENST00000599065 212 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 MTND3P19-201ENST00000603825 345 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC106052.1-201ENST00000608029 497 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC103710.4-201ENST00000609301 899 ntBASIC4.37□□□□□ -1.71
CHMP4AQ9BY43 AC010133.1-201ENST00000615809 842 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms