Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 KCTD9P5-201ENST00000504141 1170 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 CBX3P3-201ENST00000508108 532 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 APOOP4-201ENST00000513530 597 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 RNU1-143P-201ENST00000516296 146 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 MTND2P38-201ENST00000522536 667 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC007834.2-201ENST00000536310 343 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.31□□□□□ -1.88
CPNE1Q99829 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC135628.1-201ENST00000568867 534 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC011468.4-201ENST00000603942 409 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 U1.23-201ENST00000610293 146 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AL110115.1-201ENST00000614396 364 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 RNU1-68P-201ENST00000615382 146 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 U1.39-201ENST00000621562 146 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC078883.4-201ENST00000623218 367 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AL159972.1-201ENST00000625150 448 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC097655.1-201ENST00000635075 318 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CPNE1Q99829 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC002546.1-201ENST00000588041 2504 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CPNE1Q99829 AC092125.1-201ENST00000562568 1995 ntBASIC3.31□□□□□ -1.88
CPNE1Q99829 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CPNE1Q99829 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPNE1Q99829 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC012321.1-201ENST00000561622 1588 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CPNE1Q99829 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CPNE1Q99829 RNU1-70P-201ENST00000362618 164 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 Y_RNA.97-201ENST00000363094 102 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPNE1Q99829 RNY3P9-201ENST00000384727 106 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 RNA5SP44-201ENST00000410446 133 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 PPP1R11P2-201ENST00000423543 382 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 RPL27AP8-201ENST00000424277 446 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AL365184.2-201ENST00000431139 435 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 RPL35AP22-201ENST00000436855 335 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AL445567.1-201ENST00000439121 144 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 ATP5C1P1-201ENST00000441945 895 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AL592447.1-201ENST00000447592 540 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 ZNF114P1-201ENST00000453500 292 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.3□□□□□ -1.88
CPNE1Q99829 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC114967.1-201ENST00000504890 259 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC068657.1-201ENST00000520807 306 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 ERHP1-201ENST00000523006 310 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 OSBPL9P5-201ENST00000542581 171 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AP005205.1-201ENST00000563503 508 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 MIR3921-201ENST00000577308 85 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC011260.1-201ENST00000578420 472 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.3□□□□□ -1.88
CPNE1Q99829 WISP1-OT1-201ENST00000602893 642 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC106900.2-201ENST00000604994 317 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AC004067.1-201ENST00000608733 700 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AC068831.8-201ENST00000620171 435 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.3□□□□□ -1.88
CPNE1Q99829 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.3□□□□□ -1.88
CPNE1Q99829 SRP72P2-201ENST00000344851 1979 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 ZNF826P-207ENST00000622273 1910 ntBASIC3.3□□□□□ -1.88
CPNE1Q99829 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CPNE1Q99829 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CPNE1Q99829 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CPNE1Q99829 AL445523.1-201ENST00000451184 1362 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CPNE1Q99829 RNU5E-8P-201ENST00000363502 116 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CPNE1Q99829 RNU6-754P-201ENST00000391166 107 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 RNA5SP229-201ENST00000410809 99 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 CYCSP19-201ENST00000411715 316 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.29□□□□□ -1.88
CPNE1Q99829 RPL32P35-201ENST00000415214 394 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 AC233728.2-201ENST00000425348 757 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.29□□□□□ -1.88
CPNE1Q99829 MED14P1-201ENST00000430517 648 ntBASIC3.29□□□□□ -1.88
CPNE1Q99829 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.29□□□□□ -1.88
CPNE1Q99829 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.29□□□□□ -1.88
CPNE1Q99829 LARP1BP3-201ENST00000437229 869 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms